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Gene Expression Data
Assay Details
Assay
Reference: J:26753 Manley NR, et al., The role of Hoxa-3 in mouse thymus and thyroid development. Development. 1995 Jul;121(7):1989-2003
Assay type: RNA in situ
MGI Accession ID: MGI:1352843
Gene symbol: Pax1
Gene name: paired box 1
Probe: Pax1 probe3
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 10A: embryonic day 9.5; Hoxa3tm1Mrc/Hoxa3+ (more )
Structure Level Pattern Image Note
TS15: 3rd branchial pouch Present 10A
Specimen 10B: embryonic day 9.5; Hoxa3tm1Mrc/Hoxa3tm1Mrc (more )
Structure Level Pattern Image Note
TS15: 3rd branchial pouch Present 10B Expression in this mutant is the same as in wild-type embryos.
Specimen 10C: embryonic day 10.5; Hoxa3tm1Mrc/Hoxa3+ (more )
Structure Level Pattern Image Note
TS17: 3rd branchial pouch Very strong 10C
Specimen 10D: embryonic day 10.5; Hoxa3tm1Mrc/Hoxa3tm1Mrc (more )
Structure Level Pattern Image Note
TS17: 3rd branchial pouch Weak 10D
Specimen 10E: embryonic day 11.0; Hoxa3tm1Mrc/Hoxa3+ (more )
Structure Level Pattern Image Note
TS18: 3rd branchial pouch Present 10E
TS18: limb Present 10E
Specimen 10F: embryonic day 11.0; Hoxa3tm1Mrc/Hoxa3tm1Mrc (more )
Structure Level Pattern Image Note
TS18: 3rd branchial pouch Absent 10F
TS18: limb Present 10F Expression in this mutant is the same as in wild-type embryos.
Specimen 11A: embryonic day 10.5; Hoxa3tm1Mrc/Hoxa3+ (more )
Structure Level Pattern Image Note
TS17: 2nd branchial pouch endoderm Present 11A
TS17: 3rd branchial pouch endoderm Present 11A
Specimen 11B: embryonic day 10.5; Hoxa3tm1Mrc/Hoxa3tm1Mrc (more )
Structure Level Pattern Image Note
TS17: 2nd branchial pouch endoderm Present 11B Expression in this mutant is the same as in wild-type embryos.
TS17: 3rd branchial pouch endoderm Weak 11B
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory