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Phenotypes associated with this allele
Allele Symbol
Allele Name
Allele ID
Sema3atm1Mcf
targeted mutation 1, Mark C Fishman
MGI:2449920
Summary 6 genotypes
Jump to Allelic Composition Genetic Background Genotype ID
hm1
Sema3atm1Mcf/Sema3atm1Mcf involves: 129S4/SvJae MGI:2656246
ht2
Sema3atm1Mcf/Sema3a+ involves: 129S4/SvJae MGI:3770683
ht3
Sema3am808Ddg/Sema3atm1Mcf involves: 129S4/SvJae * C3H/He * C57BL/6 MGI:4455316
cx4
Ngfrtm1Jae/Ngfrtm1Jae
Sema3atm1Mcf/Sema3a+
involves: 129S4/SvJae * C57BL/6 MGI:3770681
cx5
Ngfrtm1Jae/Ngfrtm1Jae
Sema3atm1Mcf/Sema3atm1Mcf
involves: 129S4/SvJae * C57BL/6 MGI:3770682
cx6
Sema3atm1Mcf/Sema3atm1Mcf
Tg(Hoxb7-EGFP)33Cos/0
involves: 129S4/SvJae * C57BL/6 * CBA MGI:5435265


Genotype
MGI:2656246
hm1
Allelic
Composition
Sema3atm1Mcf/Sema3atm1Mcf
Genetic
Background
involves: 129S4/SvJae
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Sema3atm1Mcf mutation (0 available); any Sema3a mutation (47 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
mortality/aging
• 17% of homozygotes die at weaning
• only 12% of homozygotes survive to adulthood
• ~1% of homozygotes are weaned but die over the next 3 months
• 70% of homozygotes die within the first 3 days of life
• homozygotes that survive the first few days of life die over the next 3 weeks with fulminant right heart failure
• homozygotes are born at slightly lower than predicted Mendelian ratios

behavior/neurological
• newborn homozygotes contain less milk in their stomachs
• many homozygotes appear weak within 24 hrs after birth
• surviving homozygotes have trouble maintaining an upright posture

growth/size/body
• at P10, the right ventricle is enlarged and its wall, normally thin by this age, is hypertrophied
• rare homozygotes that survive the first days of life die over the next 3 weeks displaying right ventricular hypertrophy, such that the right ventricle is equivalent to the left in thickness
• however, no obstruction of the right ventricular outflow or pulmonary valve is observed
• surviving homozygotes are smaller than wild-type littermates

cardiovascular system
• at P10, the right ventricle is enlarged and its wall, normally thin by this age, is hypertrophied
• rare homozygotes that survive the first days of life die over the next 3 weeks displaying right ventricular hypertrophy, such that the right ventricle is equivalent to the left in thickness
• however, no obstruction of the right ventricular outflow or pulmonary valve is observed
• at P10, homozygotes display massive dilatation of the right atrium
• the right atrium is generally filled with clot

skeleton
• the sternum is thickened and displays an irregular border
• homozygotes exhibit misalignment of the ribs with the sternum
• the xiphoid process may be split
• homozygotes display partial duplication of ribs
• homozygotes display rib fusions in the thoracic region
• homozygotes exhibit fusion of cervical bones

nervous system
• axon density is increased 5.97-fold in hindlimbs and 3.74-fold in forelimbs compared to in wild-type mice
• at P12, mutant brains are smaller than normal and comparable to those of P7 wild-type littermates
• all regions of the brain are reduced, in the absence of obvious histological abnormalities in the deep grey nuclei, cerebellum, or brainstem
• at P12, the neuropil (a complex, feltlike net of axonal, dendritic, and glial arborizations located between neurons) is severely reduced
• all cortical layers are present, although less clearly demarcated
• at P12, many pyramidal neurons, esp. large pyramidal neurons of layer 5, are abnormally oriented, with processes pointing in random directions
• at P12, the thickness of the cerebral cortex is ~70% of wild-type and comparable to the thickness of the P7 wild-type cortex
• some sensory axons project into inappropriate regions of the spinal cord, reaching the central canal and medial ventral cord

respiratory system
N
• homozygotes display no evidence of pulmonary emboli or pulmonary artery hypertrophy, suggesting absence of pulmonary hypertension

cellular
• axon density is increased 5.97-fold in hindlimbs and 3.74-fold in forelimbs compared to in wild-type mice

muscle
• at P10, the right ventricle is enlarged and its wall, normally thin by this age, is hypertrophied
• rare homozygotes that survive the first days of life die over the next 3 weeks displaying right ventricular hypertrophy, such that the right ventricle is equivalent to the left in thickness
• however, no obstruction of the right ventricular outflow or pulmonary valve is observed

homeostasis/metabolism
• at P10, the dilated right atrium is generally filled with clot




Genotype
MGI:3770683
ht2
Allelic
Composition
Sema3atm1Mcf/Sema3a+
Genetic
Background
involves: 129S4/SvJae
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Sema3atm1Mcf mutation (0 available); any Sema3a mutation (47 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
• at E12.5, peripheral nerves are not as severely stunted as in Ngfrtm1Jae Sema3atm1Mcf homozygotes
• at E12.5, neuron growth is increased 1.19-fold in hindlimbs, 1.25-fold in forelimbs and 1.19-fold in trigeminal ganglion compared to Ngfrtm1Jae homozygotes

cellular
• at E12.5, peripheral nerves are not as severely stunted as in Ngfrtm1Jae Sema3atm1Mcf homozygotes
• at E12.5, neuron growth is increased 1.19-fold in hindlimbs, 1.25-fold in forelimbs and 1.19-fold in trigeminal ganglion compared to Ngfrtm1Jae homozygotes




Genotype
MGI:4455316
ht3
Allelic
Composition
Sema3am808Ddg/Sema3atm1Mcf
Genetic
Background
involves: 129S4/SvJae * C3H/He * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Sema3am808Ddg mutation (1 available); any Sema3a mutation (47 available)
Sema3atm1Mcf mutation (0 available); any Sema3a mutation (47 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
• mice exhibit the same phenotype observed in either single homozygotes
• mice exhibit the same phenotype observed in either single homozygotes

cellular
• mice exhibit the same phenotype observed in either single homozygotes




Genotype
MGI:3770681
cx4
Allelic
Composition
Ngfrtm1Jae/Ngfrtm1Jae
Sema3atm1Mcf/Sema3a+
Genetic
Background
involves: 129S4/SvJae * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Ngfrtm1Jae mutation (2 available); any Ngfr mutation (30 available)
Sema3atm1Mcf mutation (0 available); any Sema3a mutation (47 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
N
• at E12.5, mice exhibit normal neuron growth that is increased 3-fold in hindlimbs, 2.7-fold in forelimbs and 4.4-fold in trigeminal ganglion compared to Ngfrtm1Jae homozygotes




Genotype
MGI:3770682
cx5
Allelic
Composition
Ngfrtm1Jae/Ngfrtm1Jae
Sema3atm1Mcf/Sema3atm1Mcf
Genetic
Background
involves: 129S4/SvJae * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Ngfrtm1Jae mutation (2 available); any Ngfr mutation (30 available)
Sema3atm1Mcf mutation (0 available); any Sema3a mutation (47 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
• peripheral axons overshot the front observed in wild-type mice
• axon density is increased 2.28-fold in hindlimbs and 1.71-fold in forelimbs compared to in wild-type mice but not as much as in Sema3atm1Mcf homozygotes (5.97-fold in hindlimbs and 3.74-fold in forelimbs)
• increased sensitivity to Sema3A repulsion in Ngfrtm1Jae homozygotes is alleviated

cellular
• peripheral axons overshot the front observed in wild-type mice
• axon density is increased 2.28-fold in hindlimbs and 1.71-fold in forelimbs compared to in wild-type mice but not as much as in Sema3atm1Mcf homozygotes (5.97-fold in hindlimbs and 3.74-fold in forelimbs)
• increased sensitivity to Sema3A repulsion in Ngfrtm1Jae homozygotes is alleviated




Genotype
MGI:5435265
cx6
Allelic
Composition
Sema3atm1Mcf/Sema3atm1Mcf
Tg(Hoxb7-EGFP)33Cos/0
Genetic
Background
involves: 129S4/SvJae * C57BL/6 * CBA
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Sema3atm1Mcf mutation (0 available); any Sema3a mutation (47 available)
Tg(Hoxb7-EGFP)33Cos mutation (1 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
mortality/aging
• most mice (95%) die within 24 hrs after birth
• 100% lethality at 7 days after birth
• mice develop slightly below Mendelian proportions until E20

renal/urinary system
• enhanced ureteric bud branching is observed at E11.5-E14.5
• at E12-E13, ureteric bud tips are increased by about 47-64%, then the difference gradually decreases until E15
• however, embryos do not develop multiple ureteric buds and the timing of the ureteric bud outgrowth from the Wolffian duct is normal





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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory