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Phenotypes associated with this allele
Allele Symbol
Allele Name
Allele ID
Smc3+
wild type
MGI:2437842
Summary 5 genotypes
Jump to Allelic Composition Genetic Background Genotype ID
ht1
Smc3tm1.2Toshi/Smc3+ B6.Cg-Smc3tm1.2Toshi MGI:7489810
ht2
Smc3tm1a(EUCOMM)Wtsi/Smc3+ B6Dnk;B6Brd;B6N-Tyrc-Brd Smc3tm1a(EUCOMM)Wtsi/WtsiH MGI:5781751
ht3
Smc3tm1a(EUCOMM)Wtsi/Smc3+ involves: C57BL/6N MGI:5544026
cn4
Smc3tm1.1Toshi/Smc3+
Mapttm2(cre)Aha/Mapt+
involves: C57BL/6J MGI:7489855
cn5
Smc3tm1.1Toshi/Smc3+
Tg(Icam5-cre)DYyos/0
involves: C57BL/6J * DBA/2J MGI:7489862


Genotype
MGI:7489810
ht1
Allelic
Composition
Smc3tm1.2Toshi/Smc3+
Genetic
Background
B6.Cg-Smc3tm1.2Toshi
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Smc3tm1.2Toshi mutation (0 available); any Smc3 mutation (46 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
N
• at 6 weeks of age, mice exhibit normal brain size, with no detectable gross abnormalities in brain anatomy
• mice exhibit impaired synapse maturation in cortical layer II/III, with higher numbers of immature synapses detected in the cerebral cortex
• at P21, Stat1 expression in the cortex is significantly higher than in wild-type controls
• inhibition of STAT1 expression partially rescues impaired synaptic formation
• at 8 weeks of age, the percentage of mushroom-type mature spines on apical dendrites of cortical layer II/III pyramidal neurons is lower than in wild-type controls
• moreover, at 6 weeks of age, the density of mushroom-type mature spines is significantly lower than in wild-type controls
• at 6 weeks of age, the density of mushroom-type mature spines in layer II/III pyramidal neurons is significantly lower than in wild-type controls
• at 8 weeks of age, spine length of cortical layer II/III pyramidal neurons is significantly greater than in wild-type controls
• at 8 weeks of age, the percentage of thin- and filopodia-type immature spines on apical dendrites of cortical layer II/III pyramidal neurons is higher than in wild-type controls
• in contrast, the percentage of stubby spines is normal
• at 3 and 6 weeks of age, cortical layer II/III pyramidal neurons exhibit greater dendritic arbor complexity and dendrite length than in wild-type controls
• expression of the excitatory postsynaptic protein postsynaptic density 95 (PSD-95) is reduced, with no significant change in the level of the excitatory presynaptic protein SLC17A7 (aka VGlut1)
• at 6 weeks of age, EM analysis showed significantly thinner and shorter postsynaptic densities than in wild-type controls
• after culture for 21 days, cortical neurons transfected with control siRNA show fewer numbers of PSD-95-positive puncta than wild-type neurons; however, lower PSD-95 density is partially rescued by Stat1 siRNA transfection

behavior/neurological
N
• adult males (11-week-old or older) show no significant alterations in locomotion, nociception, social behavior, motor coordination, depression-like behavior or spatial memory
• in the light/dark transition test, adult males exhibit a significantly longer latency to first entry into the light box, suggesting increased anxiety; however, distances traveled in the light or dark boxes, stay time in the light box, and the number of transitions are not altered
• in the marble-burying test, adult males show more marble-burying behavior with no difference in total distance traveled
• in the novelty-induced hypophagia test, adult males show a significantly longer latency to drink sweetened condensed milk in a novel, brightly lit cage; however, milk consumption in the novel cage is not significantly altered
• in a 24-h home cage-monitoring test, mice exhibit hyperactivity during the nighttime period

growth/size/body
N
• at 1-8 weeks of age, both sexes exhibit normal body size, with no significant alterations in body weight relative to wild-type controls

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
Cornelia de Lange syndrome 3 DOID:0080507 OMIM:610759
J:242006




Genotype
MGI:5781751
ht2
Allelic
Composition
Smc3tm1a(EUCOMM)Wtsi/Smc3+
Genetic
Background
B6Dnk;B6Brd;B6N-Tyrc-Brd Smc3tm1a(EUCOMM)Wtsi/WtsiH
Cell Lines EPD0070_2_G01
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Smc3tm1a(EUCOMM)Wtsi mutation (2 available); any Smc3 mutation (46 available)
Data Sources
phenotype observed in females
phenotype observed in males
N normal phenotype
adipose tissue

growth/size/body

hematopoietic system

integument

pigmentation

skeleton




Genotype
MGI:5544026
ht3
Allelic
Composition
Smc3tm1a(EUCOMM)Wtsi/Smc3+
Genetic
Background
involves: C57BL/6N
Cell Lines EPD0070_2_G01
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Smc3tm1a(EUCOMM)Wtsi mutation (2 available); any Smc3 mutation (46 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
mortality/aging
• reduced viability at P14

immune system
• helper and cytotoxic T cells

growth/size/body

craniofacial

hematopoietic system
• helper and cytotoxic T cells




Genotype
MGI:7489855
cn4
Allelic
Composition
Smc3tm1.1Toshi/Smc3+
Mapttm2(cre)Aha/Mapt+
Genetic
Background
involves: C57BL/6J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Mapttm2(cre)Aha mutation (0 available); any Mapt mutation (453 available)
Smc3tm1.1Toshi mutation (0 available); any Smc3 mutation (46 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
behavior/neurological
• in the novelty-induced hypophagia test, adult males show a significantly longer latency to drink milk in a novel, brightly lit cage as well as reduced milk consumption relative to controls, indicating increased anxiety
• however, no significant differences are noted in the light/dark transition or marble-burying tests

nervous system
• at P21, Stat1 expression in the cortex is significantly higher than in controls




Genotype
MGI:7489862
cn5
Allelic
Composition
Smc3tm1.1Toshi/Smc3+
Tg(Icam5-cre)DYyos/0
Genetic
Background
involves: C57BL/6J * DBA/2J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Smc3tm1.1Toshi mutation (0 available); any Smc3 mutation (46 available)
Tg(Icam5-cre)DYyos mutation (0 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
• at 6 weeks of age, cortical layer II/III pyramidal neurons exhibit greater dendritic arbor complexity and dendrite length than in control mice





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last database update
12/30/2025
MGI 6.24
The Jackson Laboratory