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Phenotypes associated with this allele
Allele Symbol
Allele Name
Allele ID
Gli2tm3.1(Gli1)Alj
targeted mutation 3.1, Alexandra L Joyner
MGI:2158720
Summary 6 genotypes
Jump to Allelic Composition Genetic Background Genotype ID
hm1
Gli2tm3.1(Gli1)Alj/Gli2tm3.1(Gli1)Alj either: (involves: 129S6/SvEvTac) or (involves: 129S6/SvEvTac * Black Swiss) MGI:3846349
ht2
Gli2tm3.1(Gli1)Alj/Gli2+ either: (involves: 129S6/SvEvTac) or (involves: 129S6/SvEvTac * Black Swiss) MGI:3846353
ht3
Gli2tm2.1Alj/Gli2tm3.1(Gli1)Alj either: (involves: 129S6/SvEvTac) or (involves: 129S6/SvEvTac * Black Swiss) MGI:3846347
cx4
Gli2tm2.1Alj/Gli2tm3.1(Gli1)Alj
Shhtm1Chg/Shhtm1Chg
either: (involves: 129) or (involves: 129 * Black Swiss) MGI:3846352
cx5
Gli2tm3.1(Gli1)Alj/Gli2+
Gli3Xt-J/Gli3+
either: (involves: 129S6/SvEvTac * C3H/HeJ) or (involves: 129S6/SvEvTac * Black Swiss * C3H/HeJ) MGI:3846354
cx6
Gli1tm2Alj/Gli1tm2Alj
Gli2tm3.1(Gli1)Alj/Gli2tm3.1(Gli1)Alj
involves: 129/Sv * Black Swiss * Swiss Webster MGI:3795859


Genotype
MGI:3846349
hm1
Allelic
Composition
Gli2tm3.1(Gli1)Alj/Gli2tm3.1(Gli1)Alj
Genetic
Background
either: (involves: 129S6/SvEvTac) or (involves: 129S6/SvEvTac * Black Swiss)
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Gli2tm3.1(Gli1)Alj mutation (0 available); any Gli2 mutation (169 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
mortality/aging
• no mice are found at weaning

nervous system
N
• unlike in homozygous null mice, differentiation of floor plate, ventral interneurons and motor neurons is normal




Genotype
MGI:3846353
ht2
Allelic
Composition
Gli2tm3.1(Gli1)Alj/Gli2+
Genetic
Background
either: (involves: 129S6/SvEvTac) or (involves: 129S6/SvEvTac * Black Swiss)
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Gli2tm3.1(Gli1)Alj mutation (0 available); any Gli2 mutation (169 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
integument
• gradual loss of hair beginning on the dorsal neck and preceding caudally down the back in mice over 3 weeks of age
• around 5 months of age mice lack hair around the neck




Genotype
MGI:3846347
ht3
Allelic
Composition
Gli2tm2.1Alj/Gli2tm3.1(Gli1)Alj
Genetic
Background
either: (involves: 129S6/SvEvTac) or (involves: 129S6/SvEvTac * Black Swiss)
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Gli2tm2.1Alj mutation (1 available); any Gli2 mutation (169 available)
Gli2tm3.1(Gli1)Alj mutation (0 available); any Gli2 mutation (169 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
N
• unlike in homozygous null mice, at E10.5 the floor plate is present, interneurons are found in the appropriate location, and notochord regression is normal

respiratory system
N
• unlike in homozygous null mice, at E12.5 lung size is normal and the accessory lobe is present

integument
• gradual loss of hair beginning on the dorsal neck and preceding caudally down the back in mice over 3 weeks of age
• around 5 months of age mice lack hair around the neck




Genotype
MGI:3846352
cx4
Allelic
Composition
Gli2tm2.1Alj/Gli2tm3.1(Gli1)Alj
Shhtm1Chg/Shhtm1Chg
Genetic
Background
either: (involves: 129) or (involves: 129 * Black Swiss)
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Gli2tm2.1Alj mutation (1 available); any Gli2 mutation (169 available)
Gli2tm3.1(Gli1)Alj mutation (0 available); any Gli2 mutation (169 available)
Shhtm1Chg mutation (1 available); any Shh mutation (45 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
• at E10.5
• in about half of mice development of the diencephalic vesicles is partially rescued with partial separation into 2 vesicles seen at E10.5 or E11.5
• absent from the spinal cord at E10.5
• absence of V3 interneurons at E10.5

embryo
• at E10.5

growth/size/body
• head size is increased compared to mice homozygous null for Shh alone




Genotype
MGI:3846354
cx5
Allelic
Composition
Gli2tm3.1(Gli1)Alj/Gli2+
Gli3Xt-J/Gli3+
Genetic
Background
either: (involves: 129S6/SvEvTac * C3H/HeJ) or (involves: 129S6/SvEvTac * Black Swiss * C3H/HeJ)
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Gli2tm3.1(Gli1)Alj mutation (0 available); any Gli2 mutation (169 available)
Gli3Xt-J mutation (3 available); any Gli3 mutation (80 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
mortality/aging
• females die by 6 weeks of age

limbs/digits/tail
• polydactyl is enhanced compared to mice heterozygous for Gli3Xt-J alone

reproductive system
• all males are sterile

integument
• hair loss is more severe compared to mice heterozygous for Gli2tm3.1(Gli2)Alj alone




Genotype
MGI:3795859
cx6
Allelic
Composition
Gli1tm2Alj/Gli1tm2Alj
Gli2tm3.1(Gli1)Alj/Gli2tm3.1(Gli1)Alj
Genetic
Background
involves: 129/Sv * Black Swiss * Swiss Webster
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Gli1tm2Alj mutation (1 available); any Gli1 mutation (48 available)
Gli2tm3.1(Gli1)Alj mutation (0 available); any Gli2 mutation (169 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system





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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory