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Phenotypes associated with this allele
Allele Symbol
Allele Name
Allele ID
Nkx3-2+
wild type
MGI:1930225
Summary 9 genotypes
Jump to Allelic Composition Genetic Background Genotype ID
ht1
Nkx3-2tm1Tlu/Nkx3-2+ either: (involves: 129S1/Sv * 129X1/SvJ) or (involves: 129S1/Sv * 129X1/SvJ * C57BL/6J) MGI:3840655
ht2
Nkx3-2tm1Bobh/Nkx3-2+ involves: 129P2/OlaHsd * C57BL/6 MGI:3608884
cn3
Gt(ROSA)26Sortm1(Gli2)Jmao/Gt(ROSA)26Sor+
Smotm2Amc/Smotm2Amc
Nkx3-2tm1(cre)Wez/Nkx3-2+
involves: 129S1/Sv * 129S7/SvEvBrd * 129X1/SvJ MGI:5518632
cn4
Smotm2Amc/Smotm2Amc
Nkx3-2tm1(cre)Wez/Nkx3-2+
involves: 129S1/Sv * 129S7/SvEvBrd * 129X1/SvJ MGI:5518634
cn5
Gli3tm1Alj/Gli3tm1Alj
Nkx3-2tm1(cre)Wez/Nkx3-2+
involves: 129S6/SvEvTac * 129S7/SvEvBrd MGI:5518635
cn6
Gli3tm1Alj/Gli3tm1Alj
Nkx3-2tm1(cre)Wez/Nkx3-2+
Smotm2Amc/Smotm2Amc
involves: 129S6/SvEvTac * 129S7/SvEvBrd * 129X1/SvJ MGI:5518637
cn7
Gt(ROSA)26Sortm1(Gli2)Jmao/Gt(ROSA)26Sor+
Nkx3-2tm1(cre)Wez/Nkx3-2+
involves: 129S7/SvEvBrd MGI:5518631
cn8
Gt(ROSA)26Sortm1(Smo/EYFP)Amc/Gt(ROSA)26Sor+
Nkx3-2tm1(cre)Wez/Nkx3-2+
involves: 129S7/SvEvBrd * 129X1/SvJ MGI:5518633
cn9
Nkx3-2tm1(cre)Tsa/Nkx3-2+
Nr2f2tm2.1Tsa/Nr2f2tm2.1Tsa
involves: 129S7/SvEvBrd * C57BL/6 MGI:3579773


Genotype
MGI:3840655
ht1
Allelic
Composition
Nkx3-2tm1Tlu/Nkx3-2+
Genetic
Background
either: (involves: 129S1/Sv * 129X1/SvJ) or (involves: 129S1/Sv * 129X1/SvJ * C57BL/6J)
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Nkx3-2tm1Tlu mutation (0 available); any Nkx3-2 mutation (19 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
skeleton
• 78% of mutants exhibit mild abnormalities of the vertebrae, such as split or reduced ossification centers
• however, overall length of the vertebral column and neural arch morphology are not affected




Genotype
MGI:3608884
ht2
Allelic
Composition
Nkx3-2tm1Bobh/Nkx3-2+
Genetic
Background
involves: 129P2/OlaHsd * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Nkx3-2tm1Bobh mutation (0 available); any Nkx3-2 mutation (19 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
limbs/digits/tail
• heterozygotes are overtly normal; however, unlike wild-type mice, 46% of heterozygotes exhibit kinked tails

hearing/vestibular/ear
• at P2, newborn heterozygotes show signs of fusion between the gonium and the malleus, despite the observed gonium hypoplasia
• moreover, adult heterozygotes show no overt phenotype associated with the earlier gonium hypoplasia, with the malleus, gonium and tympanic forming a continuous skeletal structure
• although elements of the malleus, such as the processus brevis and the manubrium appear normal, the width (but not the length) of the malleus is significantly decreased
• however, at E18.5, middle ear ossicle development is relatively normal, with the incus and stapes developing as wild-type with respect to both size and articulation
• at E18.5, heterozygtes exhibit no overt defects associated with the tympanic ring but do show variable hypoplasia of the gonium, not observed in adulthood

skeleton
• at P2, newborn heterozygotes show signs of fusion between the gonium and the malleus, despite the observed gonium hypoplasia
• moreover, adult heterozygotes show no overt phenotype associated with the earlier gonium hypoplasia, with the malleus, gonium and tympanic forming a continuous skeletal structure
• although elements of the malleus, such as the processus brevis and the manubrium appear normal, the width (but not the length) of the malleus is significantly decreased
• however, at E18.5, middle ear ossicle development is relatively normal, with the incus and stapes developing as wild-type with respect to both size and articulation
• at E18.5, heterozygtes exhibit no overt defects associated with the tympanic ring but do show variable hypoplasia of the gonium, not observed in adulthood

craniofacial
• at P2, newborn heterozygotes show signs of fusion between the gonium and the malleus, despite the observed gonium hypoplasia
• moreover, adult heterozygotes show no overt phenotype associated with the earlier gonium hypoplasia, with the malleus, gonium and tympanic forming a continuous skeletal structure
• although elements of the malleus, such as the processus brevis and the manubrium appear normal, the width (but not the length) of the malleus is significantly decreased
• however, at E18.5, middle ear ossicle development is relatively normal, with the incus and stapes developing as wild-type with respect to both size and articulation
• at E18.5, heterozygtes exhibit no overt defects associated with the tympanic ring but do show variable hypoplasia of the gonium, not observed in adulthood




Genotype
MGI:5518632
cn3
Allelic
Composition
Gt(ROSA)26Sortm1(Gli2)Jmao/Gt(ROSA)26Sor+
Smotm2Amc/Smotm2Amc
Nkx3-2tm1(cre)Wez/Nkx3-2+
Genetic
Background
involves: 129S1/Sv * 129S7/SvEvBrd * 129X1/SvJ
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Gt(ROSA)26Sortm1(Gli2)Jmao mutation (0 available); any Gt(ROSA)26Sor mutation (1084 available)
Nkx3-2tm1(cre)Wez mutation (0 available); any Nkx3-2 mutation (19 available)
Smotm2Amc mutation (2 available); any Smo mutation (40 available)
phenotype observed in females
phenotype observed in males
N normal phenotype

Gli2 expression, but not Gli3 de-repression, rescues intestinal phenotypes in Smotm2Amc/Smotm2Amc Nkx3-2tm1(cre)Wez/Nkx3-2+ embryos

digestive/alimentary system
N
• intestinal development is rescued




Genotype
MGI:5518634
cn4
Allelic
Composition
Smotm2Amc/Smotm2Amc
Nkx3-2tm1(cre)Wez/Nkx3-2+
Genetic
Background
involves: 129S1/Sv * 129S7/SvEvBrd * 129X1/SvJ
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Nkx3-2tm1(cre)Wez mutation (0 available); any Nkx3-2 mutation (19 available)
Smotm2Amc mutation (2 available); any Smo mutation (40 available)
phenotype observed in females
phenotype observed in males
N normal phenotype

Intestinal mesenchymal proliferation and expansion are affected in Smotm2Amc/Smotm2Amc Nkx3-2tm1(cre)Wez/Nkx3-2+ embryos

mortality/aging
• mice die immediately after birth

digestive/alimentary system
• lack of Goblet and enteroendocrine cell lineage differentiation at E18.5
• at E18.5, mice exhibit fewer mesenchyme cells between thin layers of mesentery and intestinal epithelium compared with control mice
• lack of Goblet and enteroendocrine cell lineage differentiation at E18.5
• decreased SMA+ or Desmin+ intestinal smooth muscle cells
• absent intestinal mesenchymal proliferation
• intestinal epithelium do not proliferate at E18.5

muscle
• decreased SMA+ or Desmin+ intestinal smooth muscle cells

cellular
• lack of Goblet and enteroendocrine cell lineage differentiation at E18.5
• intestinal epithelium do not proliferate at E18.5

nervous system
• decreased population




Genotype
MGI:5518635
cn5
Allelic
Composition
Gli3tm1Alj/Gli3tm1Alj
Nkx3-2tm1(cre)Wez/Nkx3-2+
Genetic
Background
involves: 129S6/SvEvTac * 129S7/SvEvBrd
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Gli3tm1Alj mutation (1 available); any Gli3 mutation (81 available)
Nkx3-2tm1(cre)Wez mutation (0 available); any Nkx3-2 mutation (19 available)
phenotype observed in females
phenotype observed in males
N normal phenotype

Gli2 expression, but not Gli3 de-repression, rescues intestinal phenotypes in Smotm2Amc/Smotm2Amc Nkx3-2tm1(cre)Wez/Nkx3-2+ embryos

mortality/aging
N
• mice are born at the expected Mendelian ratios

digestive/alimentary system
N
• mice exhibit normal intestinal development




Genotype
MGI:5518637
cn6
Allelic
Composition
Gli3tm1Alj/Gli3tm1Alj
Nkx3-2tm1(cre)Wez/Nkx3-2+
Smotm2Amc/Smotm2Amc
Genetic
Background
involves: 129S6/SvEvTac * 129S7/SvEvBrd * 129X1/SvJ
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Gli3tm1Alj mutation (1 available); any Gli3 mutation (81 available)
Nkx3-2tm1(cre)Wez mutation (0 available); any Nkx3-2 mutation (19 available)
Smotm2Amc mutation (2 available); any Smo mutation (40 available)
phenotype observed in females
phenotype observed in males
N normal phenotype

Gli2 expression, but not Gli3 de-repression, rescues intestinal phenotypes in Smotm2Amc/Smotm2Amc Nkx3-2tm1(cre)Wez/Nkx3-2+ embryos

digestive/alimentary system
• mice exhibit the same defects as in Nkx3-2tm1(cre)Wez/Nkx3-2+ Smom2Amc/Smom2Amc mice




Genotype
MGI:5518631
cn7
Allelic
Composition
Gt(ROSA)26Sortm1(Gli2)Jmao/Gt(ROSA)26Sor+
Nkx3-2tm1(cre)Wez/Nkx3-2+
Genetic
Background
involves: 129S7/SvEvBrd
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Gt(ROSA)26Sortm1(Gli2)Jmao mutation (0 available); any Gt(ROSA)26Sor mutation (1084 available)
Nkx3-2tm1(cre)Wez mutation (0 available); any Nkx3-2 mutation (19 available)
phenotype observed in females
phenotype observed in males
N normal phenotype

Gli2 expression, but not Gli3 de-repression, rescues intestinal phenotypes in Smotm2Amc/Smotm2Amc Nkx3-2tm1(cre)Wez/Nkx3-2+ embryos

digestive/alimentary system
N
• mice exhibit normal intestinal development




Genotype
MGI:5518633
cn8
Allelic
Composition
Gt(ROSA)26Sortm1(Smo/EYFP)Amc/Gt(ROSA)26Sor+
Nkx3-2tm1(cre)Wez/Nkx3-2+
Genetic
Background
involves: 129S7/SvEvBrd * 129X1/SvJ
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Gt(ROSA)26Sortm1(Smo/EYFP)Amc mutation (1 available); any Gt(ROSA)26Sor mutation (1084 available)
Nkx3-2tm1(cre)Wez mutation (0 available); any Nkx3-2 mutation (19 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
digestive/alimentary system
• intestinal mesenchymal compartment is expanded




Genotype
MGI:3579773
cn9
Allelic
Composition
Nkx3-2tm1(cre)Tsa/Nkx3-2+
Nr2f2tm2.1Tsa/Nr2f2tm2.1Tsa
Genetic
Background
involves: 129S7/SvEvBrd * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Nkx3-2tm1(cre)Tsa mutation (0 available); any Nkx3-2 mutation (19 available)
Nr2f2tm2.1Tsa mutation (0 available); any Nr2f2 mutation (28 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
digestive/alimentary system
• altered radial patterning and anterior-posterior axis patterning of the stomach
• mesenchyme of the stomach was thickened at E16.5
• hind-stomach was expanded and exhibited a vacuolated epithelium, resembling the pyloric region, with numerous invaginations and a thickened and disorganized circular smooth muscle layer
• reduced size of fore-stomach as indicated by an anterior shift of the limiting ridge
• an anterior shift of the limiting ridge is observed
• the pylorus exhibited a disorganized thickened circular smooth muscle layer, with an epithelium that resembled the epithelium of the duodenum and was devoid of vacuoles, unlike the highly vacuolated control
• number of parietal cells increased in the thickened epithelial layer at E18.5
• thicker epithelium at E12.5, E13.5 and E18.5
• the fore-stomach epithelium did not show signs of stratification at E16.5 and resembled hind-stomach epithelium, indicating posteriorization of stomach
• thicker glandular epithelium at E16.5, however differentiation of this epithelium was unchanged
• exhibited more extensive invagination of the epithelium than in controls
• the circular smooth muscle layer of the stomach was disorganized at E13.5, E14.5 and E15.5 and was thickened in both the fore-stomach and hind-stomach, suggesting that radial patterning of the stomach was perturbed
• slightly smaller stomach at E12.5 than controls

nervous system
• expansion of enteric neurons in the stomach

muscle
• the circular smooth muscle layer of the stomach was disorganized at E13.5, E14.5 and E15.5 and was thickened in both the fore-stomach and hind-stomach, suggesting that radial patterning of the stomach was perturbed

endocrine/exocrine glands
• number of parietal cells increased in the thickened epithelial layer at E18.5

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
congenital diaphragmatic hernia DOID:3827 OMIM:142340
OMIM:222400
OMIM:610187
J:103437





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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory