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Gene Expression Data
Assay Details
Assay
Reference: J:348278 Liakath-Ali K, et al., Cartography of teneurin and latrophilin expression reveals spatiotemporal axis heterogeneity in the mouse hippocampus during development. PLoS Biol. 2024 May;22(5):e3002599
Assay type: RNA in situ
MGI Accession ID: MGI:8259044
Gene symbol: Tenm3
Gene name: teneurin transmembrane protein 3
Probe: Mm-Tenm3 (411951)
Probe preparation: Antisense DNA
Visualized with: Fluorescence
Results
Specimen 2A: embryonic day 16.5 (more )
Note: Data from bubble plots of expression level was included in the annotation. Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS24: hippocampal formation Present Non-Uniform 2A Tenm3 , 2A Tenm3 4 , S2_Tenm3 4 Dapi row 2 , S2_Tenm3 4 row 2 , S2_Tenm3 row 2 Expression was detected in the cornu Ammonis and was weak in subiculum.
TS24: dentate gyrus Present 2A Tenm3 , 2A Tenm3 4 , S2_Tenm3 4 row 2 , S2_Tenm3 row 2 , S2_Tenm3 4 Dapi row 2
TS24: entorhinal cortex Present 2A Tenm3 , 2A Tenm3 4 , S2_Tenm3 4 row 2 , S2_Tenm3 row 2 , S2_Tenm3 4 Dapi row 2
Specimen 2B: postnatal day 0 (more )
Note: Data from bubble plots of expression level was included in the annotation. Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS27: hippocampus CA1 Weak S4_Tenm3 4 Dapi row 2 , 2B Tenm3 , S4_Tenm3 4 row 2 , S4_Tenm3 row 2 , 2B Tenm3 4
TS27: hippocampus CA2 Weak S4_Tenm3 4 Dapi row 2 , 2B Tenm3 , S4_Tenm3 4 row 2 , S4_Tenm3 row 2 , 2B Tenm3 4
TS27: hippocampus CA3 Weak S4_Tenm3 4 Dapi row 2 , 2B Tenm3 , S4_Tenm3 4 row 2 , S4_Tenm3 row 2 , 2B Tenm3 4
TS27: dentate gyrus Present 2B Tenm3 , S4_Tenm3 row 2 , S4_Tenm3 4 row 2 , S4_Tenm3 4 Dapi row 2 , 2B Tenm3 4
TS27: subiculum Present 2B Tenm3 , S4_Tenm3 row 2 , S4_Tenm3 4 row 2 , S4_Tenm3 4 Dapi row 2 , 2B Tenm3 4
TS27: entorhinal cortex Present 2B Tenm3 , S4_Tenm3 4 Dapi row 2 , S4_Tenm3 4 row 2 , S4_Tenm3 row 2 , 2B Tenm3 4
Specimen 2E: postnatal day 10 (more )
Note: Data from bubble plots of expression level was included in the annotation. Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: hippocampus stratum oriens Present 2E Tenm3 4 , 2E Tenm3 , S6_Tenm3 4 Dapi row 3 , S6_Tenm3 4 row 3 , S6_Tenm3 row 3
TS28: CA1 pyramidal cell layer Present S6_Tenm3 row 3 , 2E Tenm3 4 , 2E Tenm3 , S6_Tenm3 4 row 3 , S6_Tenm3 4 Dapi row 3
TS28: CA2 pyramidal cell layer Strong S6_Tenm3 row 3 , 2E Tenm3 , S6_Tenm3 4 Dapi row 3 , 2E Tenm3 4 , S6_Tenm3 4 row 3
TS28: CA3 pyramidal cell layer Present 2E Tenm3 , S6_Tenm3 row 3 , S6_Tenm3 4 row 3 , 2E Tenm3 4 , S6_Tenm3 4 Dapi row 3
TS28: hippocampus stratum radiatum Present 2E Tenm3 4 , S6_Tenm3 row 3 , S6_Tenm3 4 row 3 , 2E Tenm3 , S6_Tenm3 4 Dapi row 3
TS28: hippocampus stratum lacunosum Present S6_Tenm3 row 3 , S6_Tenm3 4 Dapi row 3 , 2E Tenm3 4 , S6_Tenm3 4 row 3 , 2E Tenm3
TS28: dentate gyrus molecular layer Present 2E Tenm3 4 , S6_Tenm3 4 Dapi row 3 , 2E Tenm3 , S6_Tenm3 4 row 3 , S6_Tenm3 row 3
TS28: dentate gyrus granule cell layer Strong 2E Tenm3 , 2E Tenm3 4 , S6_Tenm3 4 Dapi row 3 , S6_Tenm3 row 3 , S6_Tenm3 4 row 3
TS28: dentate gyrus polymorphic layer Present 2E Tenm3 4 , S6_Tenm3 4 Dapi row 3 , 2E Tenm3 , S6_Tenm3 row 3 , S6_Tenm3 4 row 3
TS28: subiculum Present S6_Tenm3 4 row 3 , 2E Tenm3 4 , S6_Tenm3 4 Dapi row 3 , S6_Tenm3 row 3 , 2E Tenm3 Expression was detected in the presubiculum and subiculum.
TS28: entorhinal cortex Present Non-Uniform S6_Tenm3 4 row 3 , S6_Tenm3 row 3 , 2E Tenm3 , S6_Tenm3 4 Dapi row 3 , 2E Tenm3 4 Varying expression levels were detected in layers 1-6 of the entorhinal cortex.
Specimen 2F: postnatal day 30 (more )
Note: Data from bubble plots of expression level was included in the annotation. Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: hippocampus stratum oriens Weak Regionally restricted 2F Tenm3 4 , S8_Tenm3 4 row 1 , S8_Tenm3 row 1 , S8_Tenm3 4 Dapi row 1 , 2F Tenm3 Weak expression was detected in the stratum oriens of the CA1 and CA3 regions.
TS28: CA1 pyramidal cell layer Strong S8_Tenm3 row 1 , S8_Tenm3 4 row 1 , S8_Tenm3 4 Dapi row 1 , 2F Tenm3 4 , 2F Tenm3
TS28: CA2 pyramidal cell layer Strong S8_Tenm3 4 row 1 , S8_Tenm3 4 Dapi row 1 , S8_Tenm3 row 1 , 2F Tenm3 , 2F Tenm3 4
TS28: CA3 pyramidal cell layer Strong 2F Tenm3 , S8_Tenm3 4 row 1 , S8_Tenm3 row 1 , S8_Tenm3 4 Dapi row 1 , 2F Tenm3 4
TS28: hippocampus stratum radiatum Weak Regionally restricted S8_Tenm3 4 row 1 , 2F Tenm3 , S8_Tenm3 row 1 , S8_Tenm3 4 Dapi row 1 , 2F Tenm3 4 Weak expression was detected in the stratum radiatum of the CA2 and CA3 regions.
TS28: hippocampus stratum lacunosum Absent S8_Tenm3 row 1 , S8_Tenm3 4 Dapi row 1 , 2F Tenm3 , S8_Tenm3 4 row 1 , 2F Tenm3 4
TS28: dentate gyrus molecular layer Absent 2F Tenm3 4 , 2F Tenm3 , S8_Tenm3 4 row 1 , S8_Tenm3 row 1 , S8_Tenm3 4 Dapi row 1
TS28: dentate gyrus granule cell layer Strong S8_Tenm3 4 row 1 , 2F Tenm3 4 , 2F Tenm3 , S8_Tenm3 4 Dapi row 1 , S8_Tenm3 row 1
TS28: dentate gyrus polymorphic layer Present 2F Tenm3 , S8_Tenm3 row 1 , S8_Tenm3 4 Dapi row 1 , S8_Tenm3 4 row 1 , 2F Tenm3 4
TS28: subiculum Present Regionally restricted S8_Tenm3 4 row 1 , 2F Tenm3 4 , S8_Tenm3 row 1 , 2F Tenm3 , S8_Tenm3 4 Dapi row 1 Expression was detected in the subiculum but not in the presubiculum.
TS28: entorhinal cortex Present Regionally restricted 2F Tenm3 4 , S8_Tenm3 4 Dapi row 1 , S8_Tenm3 row 1 , S8_Tenm3 4 row 1 , 2F Tenm3 Diminished expression was detected in layer 2 and weak in layers 3-6 of the entorhinal cortex.
Specimen 3E P10: postnatal day 10 (more )
Note: Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: CA1 pyramidal cell layer Present 3E P10 red dotted 6 , S7_Tenm3 4 Dapi row 3 , 3E P10 red dotted 4 , S7_Tenm3 4 row 3 , S7_Tenm3 row 3 , 3E P10 left bottom
TS28: entorhinal cortex Present 3E P10 green dotted 6 , S7_Tenm3 row 3 , S7_Tenm3 4 row 3 , 3E P10 green dotted 4 , S7_Tenm3 4 Dapi row 3 , 3E P10 left bottom
Specimen 3E P30: postnatal day 30 (more )
Note: Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: CA1 pyramidal cell layer Weak S9_Tenm3 4 row 4 , 3E P30 red dotted 4 , 3E P30 left bottom , S9_Tenm3 row 4 , S9_Tenm3 4 Dapi row 4 , 3E P30 red dotted 6 A striking difference was observed between the expression at P10 and P30 in the CA1 stratum pyramidale.
TS28: entorhinal cortex Weak S9_Tenm3 4 Dapi row 4 , S9_Tenm3 4 row 4 , 3E P30 left bottom , S9_Tenm3 row 4 , 3E P30 green dotted 4 , 3E P30 green dotted 6 A striking difference was observed between the expression at P10 and P30 in the entorhinal cortex.
Specimen 7B: postnatal (more )
Note: Sections were post-fixed in 4% paraformaldehyde. Triple labeled: green - Tenm3; red - Adgrl2 (assay MGI:8259230); magenta - Adgrl3 (assay MGI:8259232).
Structure Cell Type Level Pattern Image Note
TS28: CA1 pyramidal cell layer hippocampal pyramidal neuron Present 7B' , 7B , 7B CA1 top Tenms and Lphns expression largely overlapped in CA1 stratum pyramidale cells.
TS28: dentate gyrus granule cell layer dentate gyrus granule cell Ambiguous 7B DG top , 7B'' , 7B
TS28: dentate gyrus polymorphic layer Present Regionally restricted 7B , 7B'' , 7B DG top In the dentate gyrus polymorph layer excitatory hilar cells, Tenm3 and Lphn3 expression does not overlap.
Specimen S2 row 1: embryonic day 16.5 (more )
Note: Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS24: hippocampal formation Present S2_Tenm3 4 Dapi row 1 , S2_Tenm3 4 row 1 , S2_Tenm3 row 1
Specimen S2 row 3: embryonic day 16.5 (more )
Note: Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS24: hippocampal formation Present S2_Tenm3 4 Dapi row 3 , S2_Tenm3 4 row 3 , S2_Tenm3 row 3
Specimen S2 row 4: embryonic day 16.5 (more )
Note: Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS24: hippocampal formation Present S2_Tenm3 row 4 , S2_Tenm3 4 row 4 , S2_Tenm3 4 Dapi row 4
Specimen S3 row 1: embryonic day 16.5 (more )
Note: Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS24: hippocampal formation Present S3_Tenm3 4 Dapi row 1 , S3_Tenm3 row 1 , S3_Tenm3 4 row 1
Specimen S3 row 2: embryonic day 16.5 (more )
Note: Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS24: hippocampal formation Present S3_Tenm3 4 Dapi row 2 , S3_Tenm3 4 row 2 , S3_Tenm3 row 2
Specimen S3 row 3: embryonic day 16.5 (more )
Note: Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS24: hippocampal formation Present S3_Tenm3 4 Dapi row 3 , S3_Tenm3 row 3 , S3_Tenm3 4 row 3
Specimen S3 row 4: embryonic day 16.5 (more )
Note: Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS24: hippocampal formation Present S3_Tenm3 row 4 , S3_Tenm3 4 row 4 , S3_Tenm3 4 Dapi row 4
Specimen S4 row 1: postnatal day 0 (more )
Note: Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS27: hippocampal formation Present S4_Tenm3 4 row 1 , S4_Tenm3 4 Dapi row 1 , S4_Tenm3 row 1
Specimen S4 row 3: postnatal day 0 (more )
Note: Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS27: hippocampal formation Present S4_Tenm3 row 3 , S4_Tenm3 4 row 3 , S4_Tenm3 4 Dapi row 3
Specimen S4 row 4: postnatal day 0 (more )
Note: Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS27: hippocampal formation Present S4_Tenm3 4 row 4 , S4_Tenm3 4 Dapi row 4 , S4_Tenm3 row 4
Specimen S5 row 1: postnatal day 0 (more )
Note: Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS27: hippocampal formation Present S5_Tenm3 4 row 1 , S5_Tenm3 4 Dapi row 1 , S5_Tenm3 row 1
Specimen S5 row 2: postnatal day 0 (more )
Note: Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS27: hippocampal formation Present S5_Tenm3 4 Dapi row 2 , S5_Tenm3 4 row 2 , S5_Tenm3 row 2
Specimen S5 row 3: postnatal day 0 (more )
Note: Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS27: hippocampal formation Present S5_Tenm3 4 Dapi row 3 , S5_Tenm3 4 row 3 , S5_Tenm3 row 3
Specimen S5 row 4: postnatal day 0 (more )
Note: Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS27: hippocampal formation Present S5_Tenm3 row 4 , S5_Tenm3 4 Dapi row 4 , S5_Tenm3 4 row 4
Specimen S6 row 1: postnatal day 10 (more )
Note: Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: hippocampal formation Present S6_Tenm3 4 row 1 , S6_Tenm3 4 Dapi row 1 , S6_Tenm3 row 1
Specimen S6 row 2: postnatal day 10 (more )
Note: Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: hippocampal formation Present S6_Tenm3 4 Dapi row 2 , S6_Tenm3 row 2 , S6_Tenm3 4 row 2
Specimen S6 row 4: postnatal day 10 (more )
Note: Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: hippocampal formation Present S6_Tenm3 4 row 4 , S6_Tenm3 4 Dapi row 4 , S6_Tenm3 row 4
Specimen S7 row 1: postnatal day 10 (more )
Note: Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: hippocampal formation Present S7_Tenm3 row 1 , S7_Tenm3 4 row 1 , S7_Tenm3 4 Dapi row 1
Specimen S7 row 2: postnatal day 10 (more )
Note: Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: hippocampal formation Present S7_Tenm3 row 2 , S7_Tenm3 4 Dapi row 2 , S7_Tenm3 4 row 2
Specimen S7 row 4: postnatal day 10 (more )
Note: Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: hippocampal formation Present S7_Tenm3 4 row 4 , S7_Tenm3 row 4 , S7_Tenm3 4 Dapi row 4
Specimen S8 row 2: postnatal day 30 (more )
Note: Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: hippocampal formation Present S8_Tenm3 row 2 , S8_Tenm3 4 Dapi row 2 , S8_Tenm3 4 row 2
Specimen S8 row 3: postnatal day 30 (more )
Note: Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: hippocampal formation Present S8_Tenm3 row 3 , S8_Tenm3 4 row 3 , S8_Tenm3 4 Dapi row 3
Specimen S8 row 4: postnatal day 30 (more )
Note: Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: hippocampal formation Present S8_Tenm3 4 row 4 , S8_Tenm3 4 Dapi row 4 , S8_Tenm3 row 4
Specimen S9 row 1: postnatal day 30 (more )
Note: Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: hippocampal formation Present S9_Tenm3 row 1 , S9_Tenm3 4 row 1 , S9_Tenm3 4 Dapi row 1
Specimen S9 row 2: postnatal day 30 (more )
Note: Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: hippocampal formation Present S9_Tenm3 4 row 2 , S9_Tenm3 row 2 , S9_Tenm3 4 Dapi row 2
Specimen S9 row 3: postnatal day 30 (more )
Note: Double labeled: yellow - Tenm3; magenta - Tenm4 (assay MGI:8259045). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: hippocampal formation Present S9_Tenm3 4 row 3 , S9_Tenm3 row 3 , S9_Tenm3 4 Dapi row 3
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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10/06/2026
MGI 6.29 		The Jackson Laboratory