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Gene Expression Data
Assay Details
Assay
Reference: J:327901 Ye Q, et al., Understanding the development of oral epithelial organs through single cell transcriptomic analysis. Development. 2022 Aug 15;149(16):dev200539
Assay type: RNA in situ
MGI Accession ID: MGI:7615298
Gene symbol: Shh
Gene name: sonic hedgehog
Probe: Mm-Shh (314361)
Probe preparation: Antisense DNA
Visualized with: Fluorescence
Results
Specimen 7F: embryonic day 9.5 (more )
Note: Triple labeled: white - Shh; red - Pitx2 (assay MGI:7615297); green - Tfap2b (assay MGI:7615296).
Structure Level Pattern Image Note
TS15: 1st branchial arch endoderm Present Regionally restricted 7F' , 7F Expression was detected in the oropharyngeal endoderm.
Specimen 7G: embryonic day 10.0 (more )
Note: Triple labeled: white - Shh; red - Pitx2 (assay MGI:7615297); green - Tfap2b (assay MGI:7615296).
Structure Level Pattern Image Note
TS16: 1st branchial arch endoderm Present Regionally restricted 7G , 7G' Expression was detected in the oropharyngeal endoderm.
Specimen 7H: embryonic day 10.5 (more )
Note: Triple labeled: white - Shh; red - Pitx2 (assay MGI:7615297); green - Tfap2b (assay MGI:7615296).
Structure Level Pattern Image Note
TS17: 1st branchial arch endoderm Present Regionally restricted 7H' , 7H Expression was detected in the oropharyngeal endoderm.
Specimen 7I: embryonic day 11.0 (more )
Note: Triple labeled: white - Shh; red - Pitx2 (assay MGI:7615297); green - Tfap2b (assay MGI:7615296).
Structure Level Pattern Image Note
TS18: 1st branchial arch endoderm Present Regionally restricted 7I , 7I' Expression was detected in the oropharyngeal endoderm.
Specimen 7J: embryonic day 12.0 (more )
Note: Triple labeled: white - Shh; red - Pitx2 (assay MGI:7615297); green - Tfap2b (assay MGI:7615296).
Structure Level Pattern Image Note
TS20: tooth bud Present Regionally restricted 7J , 7J' Expression was detected in the initiation knot.
Specimen S8B E12.0 right: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: tooth bud Present Regionally restricted S8B E12.0 right Expression was detected in the initiation knot.
TS20: tongue Present Regionally restricted S8B E12.0 right Expression was detected in the taste bud primordia.
Specimen S9B: embryonic day 10.5 (more )
Note: Double labeled: red - Shh; cyan - Dmrt2 (assay MGI:7615292).
Structure Level Pattern Image Note
TS17: 1st branchial arch endoderm Present S9B
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/21/2024
MGI 6.23 		The Jackson Laboratory