Gene Expression Data
Assay Details
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Assay
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Reference:
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J:268084
Saha A, et al., Class I histone deacetylases in retinal progenitors and differentiating ganglion cells. Gene Expr Patterns. 2018 Dec;30:37-48
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Assay type:
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Immunohistochemistry
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MGI Accession ID:
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MGI:6342226
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Gene symbol:
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Sox2
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Gene name:
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SRY (sex determining region Y)-box 2
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Results
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Specimen
3A:
embryonic day 16.5
(more  )
Note: Double labeled: green - Sox2; red - Hdac1 (assay MGI:6342225).
Specimen
3A:
(close  )
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Genetic Background:
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C57BL/6J
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Age:
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embryonic day 16.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Note:
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Double labeled: green - Sox2; red - Hdac1 (assay MGI:6342225).
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| Structure |
Level |
Pattern |
Image |
Note |
| TS24: retina layer |
Present |
Regionally restricted |
3A
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Expression is in retinal progenitor cells.
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Specimen
3C:
postnatal day 5
(more )
Note: Double labeled: green - Sox2; red - Hdac1 (assay MGI:6342225).
Specimen
3C:
(close )
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Genetic Background:
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C57BL/6J
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Age:
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postnatal day 5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Note:
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Double labeled: green - Sox2; red - Hdac1 (assay MGI:6342225).
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| Structure |
Level |
Pattern |
Image |
Note |
| TS28: retina layer |
Present |
Regionally restricted |
3C
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Expression is in retinal progenitor cells, Mller glial cells, retinal astrocytes, and a subset of cholinergic amacrine cells.
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Specimen
3E:
postnatal day 30
(more )
Note: Double labeled: green - Sox2; red - Hdac1 (assay MGI:6342225).
Specimen
3E:
(close )
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Genetic Background:
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C57BL/6J
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Age:
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postnatal day 30
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
|
|
Embedding:
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Cryosection
|
|
Note:
|
Double labeled: green - Sox2; red - Hdac1 (assay MGI:6342225).
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS28: retina layer |
Present |
Regionally restricted |
3E
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Expression is in Mller glial cells, retinal astrocytes, and a subset of cholinergic amacrine cells.
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Specimen
4A:
embryonic day 16.5
(more )
Note: Double labeled: green - Sox2; red - Hdac2 (assay MGI:6342232).
Specimen
4A:
(close )
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Genetic Background:
|
C57BL/6J
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Age:
|
embryonic day 16.5
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|
Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
|
Cryosection
|
|
Note:
|
Double labeled: green - Sox2; red - Hdac2 (assay MGI:6342232).
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS24: retina layer |
Present |
Regionally restricted |
4A
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Expression is in retinal progenitor cells.
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Specimen
4C:
postnatal day 5
(more )
Note: Double labeled: green - Sox2; red - Hdac2 (assay MGI:6342232).
Specimen
4C:
(close )
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Genetic Background:
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C57BL/6J
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|
Age:
|
postnatal day 5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
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|
Embedding:
|
Cryosection
|
|
Note:
|
Double labeled: green - Sox2; red - Hdac2 (assay MGI:6342232).
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS28: retina layer |
Present |
Regionally restricted |
4C
|
Expression is in retinal progenitor cells, Mller glial cells, retinal astrocytes, and a subset of cholinergic amacrine cells.
|
Specimen
4E:
postnatal day 30
(more )
Note: Double labeled: green - Sox2; red - Hdac2 (assay MGI:6342232).
Specimen
4E:
(close )
|
Genetic Background:
|
C57BL/6J
|
|
Age:
|
postnatal day 30
|
|
Sex:
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Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
|
Cryosection
|
|
Note:
|
Double labeled: green - Sox2; red - Hdac2 (assay MGI:6342232).
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS28: retina layer |
Present |
Regionally restricted |
4E
|
Expression is in Mller glial cells, retinal astrocytes, and a subset of cholinergic amacrine cells.
|
Specimen
5A:
embryonic day 16.5
(more )
Note: Double labeled: green - Sox2; red - Hdac3 (assay MGI:6342233).
Specimen
5A:
(close )
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Genetic Background:
|
C57BL/6J
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|
Age:
|
embryonic day 16.5
|
|
Sex:
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Not Specified
|
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Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
|
Cryosection
|
|
Note:
|
Double labeled: green - Sox2; red - Hdac3 (assay MGI:6342233).
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS24: retina layer |
Present |
Regionally restricted |
5A
|
Expression is in retinal progenitor cells.
|
Specimen
5C:
postnatal day 5
(more )
Note: Double labeled: green - Sox2; red - Hdac3 (assay MGI:6342233).
Specimen
5C:
(close )
|
Genetic Background:
|
C57BL/6J
|
|
Age:
|
postnatal day 5
|
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Sex:
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Not Specified
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Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
|
Cryosection
|
|
Note:
|
Double labeled: green - Sox2; red - Hdac3 (assay MGI:6342233).
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS28: retina layer |
Present |
Regionally restricted |
5C
|
Expression is in retinal progenitor cells, Mller glial cells, retinal astrocytes, and a subset of cholinergic amacrine cells.
|
Specimen
5E:
postnatal day 30
(more )
Note: Double labeled: green - Sox2; red - Hdac3 (assay MGI:6342233).
Specimen
5E:
(close )
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Genetic Background:
|
C57BL/6J
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Age:
|
postnatal day 30
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
|
Cryosection
|
|
Note:
|
Double labeled: green - Sox2; red - Hdac3 (assay MGI:6342233).
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS28: retina layer |
Present |
Regionally restricted |
5E
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Expression is in Mller glial cells, retinal astrocytes, and a subset of cholinergic amacrine cells.
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Specimen
6A:
embryonic day 16.5
(more )
Note: Double labeled: green - Sox2; red - Hdac8 (assay MGI:6342235).
Specimen
6A:
(close )
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Genetic Background:
|
C57BL/6J
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|
Age:
|
embryonic day 16.5
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|
Sex:
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Not Specified
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Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
|
Cryosection
|
|
Note:
|
Double labeled: green - Sox2; red - Hdac8 (assay MGI:6342235).
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS24: retina layer |
Present |
Regionally restricted |
6A
|
Expression is in retinal progenitor cells.
|
Specimen
6C:
postnatal day 5
(more )
Note: Double labeled: green - Sox2; red - Hdac8 (assay MGI:6342235).
Specimen
6C:
(close )
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Genetic Background:
|
C57BL/6J
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|
Age:
|
postnatal day 5
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Sex:
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Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
|
Cryosection
|
|
Note:
|
Double labeled: green - Sox2; red - Hdac8 (assay MGI:6342235).
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS28: retina layer |
Present |
Regionally restricted |
6C
|
Expression is in retinal progenitor cells, Mller glial cells, retinal astrocytes, and a subset of cholinergic amacrine cells.
|
Specimen
6E:
postnatal day 30
(more )
Note: Double labeled: green - Sox2; red - Hdac8 (assay MGI:6342235).
Specimen
6E:
(close )
|
Genetic Background:
|
C57BL/6J
|
|
Age:
|
postnatal day 30
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
|
Cryosection
|
|
Note:
|
Double labeled: green - Sox2; red - Hdac8 (assay MGI:6342235).
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS28: retina layer |
Present |
Regionally restricted |
6E
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Expression is in Mller glial cells, retinal astrocytes, and a subset of cholinergic amacrine cells.
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Specimen
S2B:
embryonic day 16.5
(more )
Note: Double labeled: green - Sox2; red - Hdac1 (assay MGI:6342225).
Specimen
S2B:
(close )
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Genetic Background:
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C57BL/6J
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Age:
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embryonic day 16.5
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Sex:
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Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
|
Cryosection
|
|
Note:
|
Double labeled: green - Sox2; red - Hdac1 (assay MGI:6342225).
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS24: retina layer |
Present |
Regionally restricted |
S2B
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Expression is in retinal progenitor cells.
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Specimen
S5B:
postnatal day 30
(more )
Note: Double labeled: green - Sox2; red - Hdac8 (assay MGI:6342235).
Specimen
S5B:
(close )
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Genetic Background:
|
C57BL/6J
|
|
Age:
|
postnatal day 30
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
|
Cryosection
|
|
Note:
|
Double labeled: green - Sox2; red - Hdac8 (assay MGI:6342235).
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS28: retina layer |
Present |
Regionally restricted |
S5B
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Expression is in Mller glial cells, retinal astrocytes, and a subset of cholinergic amacrine cells.
|
Specimen
S3D:
postnatal day 30
(more )
Note: Double labeled: green - Sox2; red - Hdac3 (assay MGI:6342233).
Specimen
S3D:
(close )
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Genetic Background:
|
C57BL/6J
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|
Age:
|
postnatal day 30
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
|
Cryosection
|
|
Note:
|
Double labeled: green - Sox2; red - Hdac3 (assay MGI:6342233).
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS28: retina layer |
Present |
Regionally restricted |
S3D
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Expression is in Mller glial cells, retinal astrocytes, and a subset of cholinergic amacrine cells.
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Analysis Tools