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Gene Expression Data
Assay Details
Assay
Reference: J:194075 Guenatri M, et al., Plasticity in Dnmt3L-dependent and -independent modes of de novo methylation in the developing mouse embryo. Development. 2013 Feb 1;140(3):562-72
Assay type: Immunohistochemistry
MGI Accession ID: MGI:6201057
Gene symbol: Dnmt3l
Gene name: DNA methyltransferase 3-like
Results
Specimen 1A Oocyte: postnatal week 5 (more )
Structure Level Pattern Image Note
TS28: oocyte Present 1A Oocyte Expression was detected on meiotic chromosomes of the ovulated oocyte.

Specimen 1A 1-cell: embryonic day 0.5 (more )
Structure Level Pattern Image Note
TS1: 1-cell stage embryo Present 1A 1-cell The maternal protein was distributed equally on the maternal and paternal pronuclei, with enrichment in DAPI-dense ring structures around nucleolar bodies.

Specimen 1A 2-cell: embryonic day 1.0 (more )
Structure Level Pattern Image Note
TS2: 2-cell stage embryo Present 1A 2-cell Expression was detected in the nucleus.

Specimen 1A 4-cell: embryonic day 2.0 (more )
Structure Level Pattern Image Note
TS3: 4-cell stage embryo Absent 1A 4-cell

Specimen 1A E2.5: embryonic day 2.5 (more )
Structure Level Pattern Image Note
TS3: compacted morula Absent 1A E2.5

Specimen 1A E3.5: embryonic day 3.5 (more )
Structure Level Pattern Image Note
TS4: blastocyst Present 1A E3.5 Expression was detected in all the blastomeres of the blastocyst. Cell-to-cell variation in intensity was noted but no obvious delineation between the inner cell mass and the trophectoderm.
TS4: inner cell mass Present 1A E3.5
TS4: trophectoderm Present 1A E3.5

Specimen 1A E4.5: embryonic day 4.5 (more )
Structure Level Pattern Image Note
TS5: inner cell mass Present 1A E4.5
TS5: trophectoderm Absent 1A E4.5

Specimen 1B E3.5: embryonic day 3.5 (more )
Note: Double labeled: green - Dnmt3l; red - Cdx2 (assay MGI:6201066).
Structure Level Pattern Image Note
TS4: blastocyst Present 1B E3.5 merge , 1B E3.5 Expression was detected in all the blastomeres of the blastocyst. Cell-to-cell variation in intensity was noted but no obvious delineation between the inner cell mass and the trophectoderm.
TS4: inner cell mass Present 1B E3.5 merge , 1B E3.5
TS4: trophectoderm Present 1B E3.5 merge , 1B E3.5

Specimen 1B E4.25: embryonic day 4.25 (more )
Note: Double labeled: green - Dnmt3l; red - Cdx2 (assay MGI:6201066).
Structure Level Pattern Image Note
TS5: blastocyst Present Regionally restricted 1B E4.25 , 1B E4.25 merge Expression progressively disappears from the mural and the polar trophectoderm (marked by Cdx2), and is instead specific to the inner cell mass.
TS5: inner cell mass Present 1B E4.25 merge , 1B E4.25
TS5: mural trophectoderm Absent 1B E4.25 , 1B E4.25 merge
TS5: polar trophectoderm Absent 1B E4.25 , 1B E4.25 merge

Specimen 1B E4.5: embryonic day 4.5 (more )
Note: Double labeled: green - Dnmt3l; red - Cdx2 (assay MGI:6201066).
Structure Level Pattern Image Note
TS5: blastocyst Present Regionally restricted 1B E4.5 , 1B E4.5 merge Expression progressively disappears from the mural and the polar trophectoderm (marked by Cdx2), and is instead specific to the inner cell mass.
TS5: inner cell mass Present 1B E4.5 , 1B E4.5 merge
TS5: mural trophectoderm Absent 1B E4.5 , 1B E4.5 merge
TS5: polar trophectoderm Absent 1B E4.5 , 1B E4.5 merge

Specimen S1 top: embryonic day 0.5 (more )
Structure Level Pattern Image Note
TS1: 1-cell stage embryo Present S1_top panel

Specimen S1 lower: embryonic day 0.5; Dnmt3ltm1Bes/Dnmt3l+ (more )
Note: Dnmt3l-/- female x Dnmt3lwt male.
Structure Level Pattern Image Note
TS1: 1-cell stage embryo Absent S1_lower panel

Specimen S2A E4: embryonic day 4.0 (more )
Note: Double labeled: green - Dnmt3l; red - Nanog (assay MGI:6201067).
Structure Level Pattern Image Note
TS6: blastocyst Present S2A E4 Dnmt3L , S2A E4 merge
TS6: primitive endoderm Present S2A E4 Dnmt3L , S2A E4 merge

Specimen S2A E4.25: embryonic day 4.25 (more )
Note: Double labeled: green - Dnmt3l; red - Nanog (assay MGI:6201067).
Structure Level Pattern Image Note
TS6: blastocyst Present S2A E4.25 merge , S2A E4.25 Dnmt3L
TS6: primitive endoderm Present S2A E4.25 merge , S2A E4.25 Dnmt3L


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory