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Gene Expression Data
Assay Details
Assay
Reference: J:157819 Shimogori T, et al., A genomic atlas of mouse hypothalamic development. Nat Neurosci. 2010;13(6):767-75
Assay type: RNA in situ
MGI Accession ID: MGI:4452073
Gene symbol: Lhx9
Gene name: LIM homeobox protein 9
Probe: UI-M-CG0p-beo-c-08-0-UI.s1
Probe preparation: Antisense labelled with fluorescein RNA
Visualized with: Alkaline phosphatase
Results
Specimen 3f: embryonic day 12.5 (more )
Note: Double labeled: brown - Lhx9; blue - Nkx2-1 (assay MGI:4450737).
Structure Level Pattern Image Note
TS20: hypothalamus Present Regionally restricted 3g , 3f Expression is present in a region ventral to the intrahypothalamic diagonal.
Specimen 3h: embryonic day 12.5 (more )
Note: Double labeled: brown - Lhx9; blue - Arx (assay MGI:4450750).
Structure Level Pattern Image Note
TS20: thalamus Present Regionally restricted 3h Expression is present in the prethalamus.
TS20: hypothalamus Present Regionally restricted 3h Expression is present in a region ventral to the intrahypothalamic diagonal.
Specimen 5a: embryonic day 12.5 (more )
Note: Double labeled: brown - Lhx9; blue - Lhx6 (assay MGI:4450765).
Structure Level Pattern Image Note
TS20: hypothalamus Present Regionally restricted 5a Expression is present in the intrahypothalamic diagonal.
Specimen 5b: embryonic day 16.5 (more )
Note: Double labeled: brown - Lhx9; blue - Lhx6 (assay MGI:4450765).
Structure Level Pattern Image Note
TS24: hypothalamus Present Regionally restricted 5b Expression is present in the intrahypothalamic diagonal.
Specimen 5g: embryonic day 12.5 (more )
Note: Double labeled: brown - Lhx9; blue - Lhx8 (assay MGI:4450748).
Structure Level Pattern Image Note
TS20: hypothalamus Present Regionally restricted 5g Expression is present in the intrahypothalamic diagonal.
Specimen 5h: embryonic day 16.5 (more )
Note: Double labeled: brown - Lhx9; blue - Lhx8 (assay MGI:4450748).
Structure Level Pattern Image Note
TS24: hypothalamus Present Regionally restricted 5h Expression is present in the intrahypothalamic diagonal.
Specimen 5k: embryonic day 12.5 (more )
Note: Double labeled: brown - Lhx9; blue - Lhx1 (assay MGI:4450905).
Structure Level Pattern Image Note
TS20: hypothalamus Present Regionally restricted 5k Expression is present in the intrahypothalamic diagonal.
Specimen 5l: embryonic day 16.5 (more )
Note: Double labeled: brown - Lhx9; blue - Lhx1 (assay MGI:4450905).
Structure Level Pattern Image Note
TS24: hypothalamus Present Regionally restricted 5l Expression is present in the intrahypothalamic diagonal.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/07/2024
MGI 6.23 		The Jackson Laboratory