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MTF#27 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#27
  • Sequence Type
    cDNA
  • ID
    MGI:3505924
  • Region Covered
    Nucleotides 301-1077 of GenBank Accession ID U95016.
  • Vector Type
    Plasmid
  • Insert Site
    HindIII/XbaI
  • Insert Size
    0.776kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers CCCAAGCTTTCGAGTTCCTGATGCGACAGC and TGCTCTAGAGAGTTCTGCCAGCCCTTGTCG. Template sequence provided by Paul Gray:
    CTCGAGGTCGACGGTATCGATAAGCTTTCGAGTTCTGATGCGACAGCCCAGCGTCACCAT
    CGGCCGCAACTCGTCGCAGGGCTCGGTGGACCTAAGCATGGGCCTGTCGAGCTTCATTTC
    CCGGCGCCACCTGCAGCTCAGCTTCCAGGAGCCTCACTTCTATCTTCGCTGTCTCGGCAA
    GAACGGCGTCTTCGTGGACGGGGCCTTCCAGAGGCGCGGAGCGCCCGCCCTGCAGCTACC
    CCAACAATGCACCTTCCGGTTCCCGAGCACGGCCATCAAGTTCCAGTTCACATCGCTATA
    CCATAAAGAGGAGGCCCCAGCATCGCCCCTGCGGCCACTCTACCCACAGATCTCCCCACT
    GAAGATCCACATTCCGGAGCCGGATCTCCGGAGCCTCGTCAGCCCCATCCCTTCCCCAAC
    CGGCACCATCAGTGTCCCCAACTCCTGTCCAGCAAGTCCTCGAGGGGCTGGGTCATCCAG
    TTATCGCTTTGTCCAGAATGTGACCTCCGACCTTCAGCTGGCCGCAGAGTTTGCTGCGAA
    GGCCGCCTCCGAGCAGCAAGCAGATGCGTCTGGCGGAGACAGCCCCAAGGACGAGTCGAA
    GCCACCGTACTCCTATGCGCAGCTGATCGTGCAGGCCATCTCCTCAGCCCAGGACAGGCA
    GCTAACACTAAGTGGCATCTACGCCCACATCACCAAACACTACCCTTACTACAGGGACTG
    CCGACAAGGGCTGGCAGAACTCTCTAGAGCGGCCGCCACCGCGGTGGAGCTCCAGCTTTT
    GNTCCCTTTAGTGAGGGTTAATTTCGAGCTNGGCGTAATCATGGTCATAGCTGTTTCCTG
    TGTGAAAATGNTATCCGCTCACAATCCACACNACATACGAGCCGGAAGCATAAGNGTAAA
    GCCTGGGGNGCCTAANGAGNGNGCTAACTCACATTAATTGNGNTGCGNTCATNGCCCCNT
    TCCAGTCGGGNAACCTGTCNGGNCAGCTGNATTAANGATCNGCCNNCCCCCGGGGNAANG
    GNGTTTGCNAATTGGGGGNCTTTTCGCTTCCNCNCTNAANAAANNNCTGNCCTCNGGCGT
    TCGGGTGGGGGGNAGGGANTAACTN
  • Synonyms
    GUDMAP:5190 probe, GUDMAP:7248 probe, GUDMAP:13338 probe, maprobe:20
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Foxk1 forkhead box K1
Expression
  • Assay Results
    54
Sequences
U95016 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:152838 Fu H, et al., A genome-wide screen for spatially restricted expression patterns identifies transcription factors that regulate glial development. J Neurosci. 2009 Sep 9;29(36):11399-408
J:168654 Chung YC, et al., Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus. Gene Expr Patterns. 2011 Jan-Feb;11(1-2):84-92
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory