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GO Annotations Graph
Symbol
Name
ID
Otx1
orthodenticle homeobox 1
MGI:97450

GO annotations  (Text View)    (Tabular View)

A table of the annotations represented in this image is provided below.
CategoryGO IDClassification TermEvidenceReference
Molecular FunctionGO:0003677DNA bindingIEAJ:60000
Molecular FunctionGO:0003677DNA bindingIEAJ:72247
Molecular FunctionGO:0005515protein bindingIPIJ:89367
Molecular FunctionGO:0000978RNA polymerase II core promoter proximal region sequence-specific DNA bindingISOJ:164563
Molecular FunctionGO:0043565sequence-specific DNA bindingIEAJ:72247
Molecular FunctionGO:0003700transcription factor activity, sequence-specific DNA bindingIEAJ:72247
Molecular FunctionGO:0001077transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific bindingISOJ:164563
Cellular ComponentGO:0005634nucleusICJ:89367
Biological ProcessGO:0009952anterior/posterior pattern specificationIGIJ:89367
Biological ProcessGO:0048852diencephalon morphogenesisIGIJ:166617
Biological ProcessGO:0030900forebrain developmentIGIJ:98539
Biological ProcessGO:0030900forebrain developmentIGIJ:91011
Biological ProcessGO:0042472inner ear morphogenesisIMPJ:53713
Biological ProcessGO:0042472inner ear morphogenesisIGIJ:53713
Biological ProcessGO:0022037metencephalon developmentIGIJ:166617
Biological ProcessGO:0030901midbrain developmentIGIJ:166617
Biological ProcessGO:0030901midbrain developmentIGIJ:91011
Biological ProcessGO:0007275multicellular organism developmentIEAJ:72247
Biological ProcessGO:0007275multicellular organism developmentIEAJ:60000
Biological ProcessGO:0045944positive regulation of transcription from RNA polymerase II promoterISOJ:164563
Biological ProcessGO:0006357regulation of transcription from RNA polymerase II promoterIDAJ:89367
Biological ProcessGO:0006355regulation of transcription, DNA-templatedIEAJ:72247
Biological ProcessGO:0006366transcription from RNA polymerase II promoterISOJ:164563


Gene Ontology Evidence Code Abbreviations:

Experimental:
EXP
Inferred from experiment
HMP
Inferred from high throughput mutant phenotype
HGI
Inferred from high throughput genetic interaction
HDA
Inferred from high throughput direct assay
HEP
Inferred from high throughput expression pattern
IDA
Inferred from direct assay
IEP
Inferred from expression pattern
IGI
Inferred from genetic interaction
IMP
Inferred from mutant phenotype
IPI
Inferred from physical interaction
Homology:
IAS
Inferred from ancestral sequence
IBA
Inferred from biological aspect of ancestor
IBD
Inferred from biological aspect of descendant
IKR
Inferred from key residues
IMR
Inferred from missing residues
IRD
Inferred from rapid divergence
ISA
Inferred from sequence alignment
ISM
Inferred from sequence model
ISO
Inferred from sequence orthology
ISS
Inferred from sequence or structural similarity
Automated:
IEA
Inferred from electronic annotation
RCA
Reviewed computational analysis
Other:
IC
Inferred by curator
NAS
Non-traceable author statement
ND
No biological data available
TAS
Traceable author statement


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
09/13/2022
MGI 6.21
The Jackson Laboratory