Prdm9 GO Annotations Graph

GO Annotations Graph

Symbol
Name
ID

Prdm9
PR domain containing 9
MGI:2384854

GO annotations (Text View) (Tabular View)

A table of the annotations represented in this image is provided below.

Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
Graph generated Fri Mar 10 20:53:16 2023.

Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP: Inferred from experiment
HMP: Inferred from high throughput mutant phenotype
HGI: Inferred from high throughput genetic interaction
HDA: Inferred from high throughput direct assay
HEP: Inferred from high throughput expression pattern
IDA: Inferred from direct assay
IEP: Inferred from expression pattern
IGI: Inferred from genetic interaction
IMP: Inferred from mutant phenotype
IPI: Inferred from physical interaction

Homology:

IAS: Inferred from ancestral sequence
IBA: Inferred from biological aspect of ancestor
IBD: Inferred from biological aspect of descendant
IKR: Inferred from key residues
IMR: Inferred from missing residues
IRD: Inferred from rapid divergence
ISA: Inferred from sequence alignment
ISM: Inferred from sequence model
ISO: Inferred from sequence orthology
ISS: Inferred from sequence or structural similarity

Automated:

IEA: Inferred from electronic annotation
RCA: Reviewed computational analysis

Other:

IC: Inferred by curator
NAS: Non-traceable author statement
ND: No biological data available
TAS: Traceable author statement

Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0003677	DNA binding	IEA	J:60000
Molecular Function	GO:0046975	histone H3K36 methyltransferase activity	IMP	J:233373
Molecular Function	GO:0046975	histone H3K36 methyltransferase activity	ISO	J:164563
Molecular Function	GO:0046975	histone H3K36 methyltransferase activity	IBA	J:265628
Molecular Function	GO:0140955	histone H3K36 trimethyltransferase activity	IEA	J:72245
Molecular Function	GO:0042800	histone H3K4 methyltransferase activity	ISO	J:164563
Molecular Function	GO:0042800	histone H3K4 methyltransferase activity	IMP	J:290204
Molecular Function	GO:0042800	histone H3K4 methyltransferase activity	EXP	J:102875
Molecular Function	GO:0042800	histone H3K4 methyltransferase activity	ISO	J:164563
Molecular Function	GO:0042800	histone H3K4 methyltransferase activity	IMP	J:233373
Molecular Function	GO:0042800	histone H3K4 methyltransferase activity	IDA	J:277873
Molecular Function	GO:0042800	histone H3K4 methyltransferase activity	IBA	J:265628
Molecular Function	GO:0042800	histone H3K4 methyltransferase activity	IMP	J:180577
Molecular Function	GO:0042800	histone H3K4 methyltransferase activity	IDA	J:102875
Molecular Function	GO:0042800	histone H3K4 methyltransferase activity	IMP	J:102875
Molecular Function	GO:0140949	histone H3K9 trimethyltransferase activity	IEA	J:72245
Molecular Function	GO:0140944	histone H4K20 monomethyltransferase activity	IEA	J:72245
Molecular Function	GO:0140941	histone H4K20me methyltransferase activity	IEA	J:72245
Molecular Function	GO:0042054	histone methyltransferase activity	IEA	J:72247
Molecular Function	GO:0046872	metal ion binding	IEA	J:60000
Molecular Function	GO:0008168	methyltransferase activity	IEA	J:60000
Molecular Function	GO:0005515	protein binding	IPI	J:277855
Molecular Function	GO:0005515	protein binding	IPI	J:267768
Molecular Function	GO:0042803	protein homodimerization activity	IDA	J:277873
Molecular Function	GO:0010844	recombination hotspot binding	ISO	J:164563
Molecular Function	GO:0010844	recombination hotspot binding	IBA	J:265628
Molecular Function	GO:0010844	recombination hotspot binding	IDA	J:180577
Molecular Function	GO:0010844	recombination hotspot binding	IMP	J:213187
Molecular Function	GO:0043565	sequence-specific DNA binding	IDA	J:180577
Molecular Function	GO:0000976	transcription cis-regulatory region binding	ISO	J:164563
Molecular Function	GO:0016740	transferase activity	IEA	J:60000
Cellular Component	GO:0000785	chromatin	IDA	J:255344
Cellular Component	GO:0005694	chromosome	IEA	J:60000
Cellular Component	GO:0005654	nucleoplasm	TAS	Reactome:R-MMU-1214198
Cellular Component	GO:0005654	nucleoplasm	TAS	Reactome:R-MMU-912383
Cellular Component	GO:0005654	nucleoplasm	TAS	Reactome:R-NUL-1214205
Cellular Component	GO:0005654	nucleoplasm	IC	J:102875
Cellular Component	GO:0005634	nucleus	IDA	J:250814
Cellular Component	GO:0005634	nucleus	IDA	J:277855
Cellular Component	GO:0005634	nucleus	IDA	J:255344
Cellular Component	GO:0005634	nucleus	IBA	J:265628
Biological Process	GO:0006325	chromatin organization	IEA	J:60000
Biological Process	GO:1990918	double-strand break repair involved in meiotic recombination	IMP	J:250814
Biological Process	GO:1990918	double-strand break repair involved in meiotic recombination	IMP	J:255344
Biological Process	GO:0007292	female gamete generation	IMP	J:255344
Biological Process	GO:0016571	histone methylation	IEA	J:72247
Biological Process	GO:0007129	homologous chromosome pairing at meiosis	IMP	J:255344
Biological Process	GO:0007129	homologous chromosome pairing at meiosis	IMP	J:250814
Biological Process	GO:0048232	male gamete generation	IMP	J:255344
Biological Process	GO:0007127	meiosis I	IMP	J:102875
Biological Process	GO:0007127	meiosis I	IMP	J:102875
Biological Process	GO:0007127	meiosis I	IMP	J:102875
Biological Process	GO:0007127	meiosis I	IMP	J:102875
Biological Process	GO:0051321	meiotic cell cycle	IEA	J:60000
Biological Process	GO:0006311	meiotic gene conversion	ISO	J:73065
Biological Process	GO:0032259	methylation	IEA	J:60000
Biological Process	GO:0043066	negative regulation of apoptotic process	IMP	J:277855
Biological Process	GO:1905516	positive regulation of fertilization	IMP	J:250814
Biological Process	GO:0060903	positive regulation of meiosis I	IMP	J:102875
Biological Process	GO:0010845	positive regulation of reciprocal meiotic recombination	IBA	J:265628
Biological Process	GO:0010845	positive regulation of reciprocal meiotic recombination	IMP	J:159887
Biological Process	GO:0010845	positive regulation of reciprocal meiotic recombination	ISO	J:73065
Biological Process	GO:0010845	positive regulation of reciprocal meiotic recombination	IMP	J:180577
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IDA	J:102875
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IMP	J:102875
Biological Process	GO:0006355	regulation of DNA-templated transcription	IEA	J:72247
Biological Process	GO:0007283	spermatogenesis	IMP	J:143556

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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