GO Annotations Graph

• Symbol: Pabpc1
• Name: poly(A) binding protein, cytoplasmic 1
• ID: MGI:1349722

GO annotations

A table of the annotations represented in this image is provided below.

• Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
• Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
• Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
• Graph generated Fri Mar 10 20:53:16 2023.

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Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP Inferred from experiment

HMP Inferred from high throughput mutant phenotype

HGI Inferred from high throughput genetic interaction

HDA Inferred from high throughput direct assay

HEP Inferred from high throughput expression pattern

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

Homology:

IAS Inferred from ancestral sequence

IBA Inferred from biological aspect of ancestor

IBD Inferred from biological aspect of descendant

IKR Inferred from key residues

IMR Inferred from missing residues

IRD Inferred from rapid divergence

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

Automated:

IEA Inferred from electronic annotation

RCA Reviewed computational analysis

Other:

IC Inferred by curator

NAS Non-traceable author statement

ND No biological data available

TAS Traceable author statement

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Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0003730	mRNA 3'-UTR binding	ISO	J:164563
Molecular Function	GO:0003730	mRNA 3'-UTR binding	IBA	J:265628
Molecular Function	GO:0003729	mRNA binding	ISO	J:164563
Molecular Function	GO:0003729	mRNA binding	ISO	J:155856
Molecular Function	GO:0003676	nucleic acid binding	IEA	J:72247
Molecular Function	GO:0008143	poly(A) binding	ISO	J:164563
Molecular Function	GO:0008143	poly(A) binding	IBA	J:265628
Molecular Function	GO:0008143	poly(A) binding	ISO	J:124723
Molecular Function	GO:0008143	poly(A) binding	ISO	J:197742
Molecular Function	GO:0008266	poly(U) RNA binding	IBA	J:265628
Molecular Function	GO:0008266	poly(U) RNA binding	ISO	J:197742
Molecular Function	GO:0005515	protein binding	IPI	J:139263
Molecular Function	GO:0005515	protein binding	IPI	J:128466
Molecular Function	GO:0003723	RNA binding	ISO	J:164563
Cellular Component	GO:0071013	catalytic step 2 spliceosome	ISO	J:164563
Cellular Component	GO:0031252	cell leading edge	ISO	J:164563
Cellular Component	GO:0042995	cell projection	IEA	J:60000
Cellular Component	GO:0005737	cytoplasm	ISO	J:164563
Cellular Component	GO:0005737	cytoplasm	IDA	J:139263
Cellular Component	GO:0036464	cytoplasmic ribonucleoprotein granule	ISO	J:164563
Cellular Component	GO:0010494	cytoplasmic stress granule	IBA	J:265628
Cellular Component	GO:0010494	cytoplasmic stress granule	ISO	J:73065
Cellular Component	GO:0005829	cytosol	ISO	J:164563
Cellular Component	GO:0005829	cytosol	ISO	J:164563
Cellular Component	GO:0005829	cytosol	IBA	J:265628
Cellular Component	GO:0030425	dendrite	ISO	J:155856
Cellular Component	GO:0106002	mCRD-mediated mRNA stability complex	ISO	J:164563
Cellular Component	GO:1990124	messenger ribonucleoprotein complex	ISO	J:155856
Cellular Component	GO:0005634	nucleus	IBA	J:265628
Cellular Component	GO:0005634	nucleus	ISO	J:73065
Cellular Component	GO:1990904	ribonucleoprotein complex	ISO	J:164563
Cellular Component	GO:1990904	ribonucleoprotein complex	IBA	J:265628
Cellular Component	GO:0005681	spliceosomal complex	IEA	J:60000
Cellular Component	GO:0045202	synapse	EXP	J:263376
Cellular Component	GO:0045202	synapse	IDA	J:263376
Cellular Component	GO:0045202	synapse	EXP	J:263402
Cellular Component	GO:0045202	synapse	IDA	J:263402
Cellular Component	GO:0045202	synapse	IDA	J:263402
Biological Process	GO:0006397	mRNA processing	IEA	J:60000
Biological Process	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	IEA	J:60000
Biological Process	GO:1900153	positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	IMP	J:196089
Biological Process	GO:0060213	positive regulation of nuclear-transcribed mRNA poly(A) tail shortening	IMP	J:196089
Biological Process	GO:0008380	RNA splicing	IEA	J:60000
Biological Process	GO:0031047	RNA-mediated gene silencing	IMP	J:196089