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Mapping Data
Experiment
  • Experiment
    CROSS
  • Chromosome
    7
  • Reference
    J:34178 Welch CL, et al., Genetic regulation of cholesterol homeostasis: chromosomal organization of candidate genes. J Lipid Res. 1996 Jul;37(7):1406-21
  • ID
    MGI:48100
Genes
GeneAlleleAssay TypeDescription
Lgals4 reported elsewhere
Lgals6 reported elsewhere
D7Ucla5 reported elsewhere
Apoe reported elsewhere
Lipe reported elsewhere
D7Ucla2 reported elsewhere
D7Mit20 PCR amplified length variant
D7Mit52 PCR amplified length variant
Nr2f2 Southern analysis Arp-1 CoZFrag
D7Mit17 PCR amplified length variant
D7Ucla6 reported elsewhere
D7Ucla7 reported elsewhere
D7Mit7 PCR amplified length variant
D7Mit8 PCR amplified length variant
D7Mit187 PCR amplified length variant
D7Ucla1 reported elsewhere
D7Mit12 PCR amplified length variant
D7Nds4 reported elsewhere
Notes
  • Reference
    The marker maps experimentally derived in this paper were overlapped with published maps for a number of QTL regions associated with plasma total cholesterol (Chromosomes 1, 5, 6, 7, 12, 15 ,18), plasma HDL cholesterol (Chromosomes 1, 5, 7, 17), plasma LDL/VLDL cholesterol (Chromosomes 9, 12, 13, 15), plasma triglyceride (Chromosomes 5, 7), gallstones (Chromosome 2), and obesity (Chromosomes 4, 6, 7, 9, 12, 15). Authors use Lipc, Brn3.1, Ghrhrr, Gad-1ps, Otf11, Sel1, Tcfcoup2, Crfr, Brn5.0, G6pd, Otf9, Igl1, Pgs1, Lgals1 and Lgals2 for locus symbols Hpl, Pou4f3, Ghrhr, Gad1-ps, Pou2f3, DSell, Aporp1, Crhr, Pou6f1, G6pdx, Pou3f4, Igl-5, Ptgs1, Lgals4 and Lgals6 respectively.
CROSS
  • Type
    Backcross, female
  • Female Parent
    <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
  • Strain
    (C57BL/6J x M. spretus)F1
  • Male Parent
    <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>
  • Strain
    C57BL/6J
  • Mapping Panel
    UCLA (BSB)
  • Allele 1
    b from C57BL/6J
  • Allele 2
    s from M. spretus
2x2 Data Reported
Marker 1 Marker 2 # Recombinants # Parentals
Lgals4 Lgals6 0 66
Lgals4 D7Ucla5 0 66
Lgals6 D7Ucla5 0 66
Lgals4 Apoe 3 63
Lgals6 Apoe 3 63
D7Ucla5 Apoe 3 63
Apoe Lipe 1 65
Apoe D7Ucla2 1 65
Apoe D7Mit20 1 65
Lipe D7Ucla2 0 66
D7Ucla2 D7Mit20 0 63
Lipe D7Mit52 6 57
D7Ucla2 D7Mit52 6 57
D7Mit20 D7Mit52 6 57
D7Mit52 Nr2f2 3 53
Nr2f2 D7Mit17 9 41
Nr2f2 D7Ucla6 9 41
D7Mit17 D7Ucla6 0 50
D7Mit17 D7Ucla7 4 62
D7Ucla6 D7Ucla7 4 62
D7Ucla7 D7Mit7 5 48
D7Mit7 D7Mit8 1 35
D7Mit8 D7Mit187 3 38
D7Mit187 D7Ucla1 1 59
D7Ucla1 D7Mit12 5 57
D7Mit12 D7Nds4 2 61
Statistics
Marker 1 Marker 2 # Recombinants Total % Recombinants Std Error
Lgals4 Lgals6 0 66 0.000 0.000
Lgals4 D7Ucla5 0 66 0.000 0.000
Lgals6 D7Ucla5 0 66 0.000 0.000
Lgals4 Apoe 3 66 4.545 2.564
Lgals6 Apoe 3 66 4.545 2.564
D7Ucla5 Apoe 3 66 4.545 2.564
Apoe Lipe 1 66 1.515 1.504
Apoe D7Ucla2 1 66 1.515 1.504
Apoe D7Mit20 1 66 1.515 1.504
Lipe D7Ucla2 0 66 0.000 0.000
D7Ucla2 D7Mit20 0 63 0.000 0.000
Lipe D7Mit52 6 63 9.524 3.698
D7Ucla2 D7Mit52 6 63 9.524 3.698
D7Mit20 D7Mit52 6 63 9.524 3.698
D7Mit52 Nr2f2 3 56 5.357 3.009
Nr2f2 D7Mit17 9 50 18.000 5.433
Nr2f2 D7Ucla6 9 50 18.000 5.433
D7Mit17 D7Ucla6 0 50 0.000 0.000
D7Mit17 D7Ucla7 4 66 6.061 2.937
D7Ucla6 D7Ucla7 4 66 6.061 2.937
D7Ucla7 D7Mit7 5 53 9.434 4.015
D7Mit7 D7Mit8 1 36 2.778 2.739
D7Mit8 D7Mit187 3 41 7.317 4.067
D7Mit187 D7Ucla1 1 60 1.667 1.653
D7Ucla1 D7Mit12 5 62 8.065 3.458
D7Mit12 D7Nds4 2 63 3.175 2.209

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last database update
04/06/2021
MGI 6.16
The Jackson Laboratory