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Mapping Data
Experiment
  • Experiment
    CROSS
  • Chromosome
    7
  • Reference
    J:18520 Watanabe H, et al., Mouse cartilage matrix deficiency (cmd) caused by a 7 bp deletion in the aggrecan gene. Nat Genet. 1994 Jun;7(2):154-7
  • ID
    MGI:43626
Genes
GeneAlleleAssay TypeDescription
Gpi1 reported elsewhere
Gabra4 reported elsewhere
Hras1-ps1 reported elsewhere
Acan Southern analysis Agc cDNA1
Tyr reported elsewhere
Zp2 reported elsewhere
Notes
  • Reference
    cmd (cartilage matrix deficiency) is a mutation at the Agc locus caused by a 7bp deletion in exon 5 of Agc. Authors report Gabra4 mapping to Chromosome 7, subsequent data report this locus mapping to Chromosome 5, see J:62530 (Tarantino LM, Genomics 2000;66:55-64)
  • Experiment
    Offspring types indicate alleles inherited from F1 parent.
    F1 direction known.
CROSS
  • Type
    Backcross, female
  • Female Parent
    <n> <n> <n> <n> <n> <n>/<s> <s> <s> <s> <s> <s>
  • Strain
    (NFS/N x M. spretus)F1
  • Male Parent
    <s> <s> <s> <s> <s> <s>/<s> <s> <s> <s> <s> <s>
  • Strain
    M. spretus or C58/J
  • Allele 1
    n from NFS/N
  • Allele 2
    s from M. spretus or C58/J
2x2 Data Reported
Marker 1 Marker 2 # Recombinants # Parentals
Gpi1 Gabra4 15 87
Gabra4 Hras1-ps1 4 80
Hras1-ps1 Acan 4 83
Acan Tyr 9 99
Tyr Zp2 12 90
Statistics
Marker 1 Marker 2 # Recombinants Total % Recombinants Std Error
Gabra4 Hras1-ps1 4 84 4.762 2.324
Gpi1 Gabra4 15 102 14.706 3.507
Hras1-ps1 Acan 4 87 4.598 2.245
Tyr Zp2 12 102 11.765 3.190
Acan Tyr 9 108 8.333 2.660

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
11/26/2019
MGI 6.14
The Jackson Laboratory