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Mapping Data
Experiment
  • Experiment
    CROSS
  • Chromosome
    2
  • Reference
    J:14462 Zuberi AR, et al., High-resolution mapping of a minor histocompatibility antigen gene on mouse chromosome 2. Mamm Genome. 1993 Sep;4(9):516-22
  • ID
    MGI:42542
Genes
GeneAlleleAssay TypeDescription
Hdc Southern analysis pCMV5
Mpmv28 Southern analysis pMX17dp
D2Nds3 PCR amplified length variant
Tgm3 visible phenotype
Itpa Southern analysis
D2Mit77 PCR amplified length variant B738
Evi4 Southern analysis pSE1.7
Pcna Southern analysis pCG4
Prnp Southern analysis p1.40
Chgb Southern analysis Scg-1 cDNA
Bmp2 Southern analysis pBMP2-68
D2Mit70 PCR amplified length variant B554
D2Mit19 PCR amplified length variant A83
D2Mit46 PCR amplified length variant A657
D2Mit28 PCR amplified length variant D25
D2Ler1 Southern analysis p3A9
H3b immunological
Pax1 Pax1un visible phenotype
Notes
  • Reference
    In the B10.UW x (CAST x B10.UW)F1 cross there was a preference in N2 mice for CAST alleles at we, un and Aw.
CROSS
  • Type
    Backcross, male
  • Female Parent
    <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>
  • Strain
    B10.UW
  • Male Parent
    <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>/<b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>
  • Strain
    (CAST x B10.UW)F1
  • Allele 1
    b from B10.UW
  • Allele 2
    c from CAST
2x2 Data Reported
Marker 1 Marker 2 # Recombinants # Parentals
Hdc Mpmv28 0 536
Mpmv28 D2Nds3 0 536
D2Nds3 Tgm3 0 536
Tgm3 Itpa 0 536
Itpa D2Mit77 0 536
D2Mit77 Evi4 0 536
Evi4 Pcna 0 536
Pcna Prnp 0 536
Prnp Chgb 2 534
Chgb Bmp2 0 536
Bmp2 D2Mit70 0 536
D2Mit70 D2Mit19 0 536
D2Mit19 D2Mit46 0 536
D2Mit46 D2Mit28 3 533
D2Mit28 D2Ler1 3 533
D2Ler1 H3b 2 534
H3b Pax1 1 535
Statistics
Marker 1 Marker 2 # Recombinants Total % Recombinants Std Error
Hdc Mpmv28 0 536 0.000 0.000
Mpmv28 D2Nds3 0 536 0.000 0.000
D2Nds3 Tgm3 0 536 0.000 0.000
Tgm3 Itpa 0 536 0.000 0.000
Itpa D2Mit77 0 536 0.000 0.000
D2Mit77 Evi4 0 536 0.000 0.000
Evi4 Pcna 0 536 0.000 0.000
Pcna Prnp 0 536 0.000 0.000
Prnp Chgb 2 536 0.373 0.263
Chgb Bmp2 0 536 0.000 0.000
Bmp2 D2Mit70 0 536 0.000 0.000
D2Mit70 D2Mit19 0 536 0.000 0.000
D2Mit19 D2Mit46 0 536 0.000 0.000
D2Mit46 D2Mit28 3 536 0.560 0.322
D2Mit28 D2Ler1 3 536 0.560 0.322
D2Ler1 H3b 2 536 0.373 0.263
H3b Pax1 1 536 0.187 0.186

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
08/04/2020
MGI 6.15
The Jackson Laboratory