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Mapping Data
Experiment
  • Experiment
    CROSS
  • Chromosome
    2
  • Reference
    J:912 Avraham KB, et al., Murine chromosomal location of four hepatocyte-enriched transcription factors: HNF-3 alpha, HNF-3 beta, HNF-3 gamma, and HNF-4. Genomics. 1992 Jun;13(2):264-8
  • ID
    MGI:40871
Genes
GeneAlleleAssay TypeDescription
Pax1 reported elsewhere Siracusa, et al., Genomixcs 6:491-504, 1990
Foxa2 Southern analysis HNF-3(beta)
Hck reported elsewhere Siracusa, et al., Genetics 122:669-679, 1989
Src reported elsewhere Siracusa, et al., Genetics 122:669-679, 1989
Ada reported elsewhere Siracusa, et al., Genetics 122:669-679, 1989
Hnf4a Southern analysis HNF-4
Notes
  • Reference
    Revised gene symbols Hck, Hnf3a, Hnf3b, Hnf3g, Tcf-4 and Tpi-rs3 (formerly Hck-1, Tcf-3a Tcf-3b, Tcf-3g, Hnf-4 and Tpi-3 respectively).
  • Experiment
    Data for 81 mice are presented. Up to 150 mice were analyzed for some pairs of markers producing the following statement of order and distance: centromere - Pax-1 - 3.1 +/- 1.5cM - Tcf-3b - 2.7 +/- 1.5cM - Hck - 4.0 +/- 1.6cM - Src - 2.7 +/- 1.3cM - (Ada, Tcf-4).Offspring types indicate alleles inherited from F1 parent.
CROSS
  • Type
    Backcross, female
  • Female Parent
    <b> <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s> <s>
  • Strain
    (C57BL/6J x M. spretus)F1
  • Male Parent
    <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b>
  • Strain
    C57BL/6J
  • Mapping Panel
  • Allele 1
    b from C57BL/6J
  • Allele 2
    s from M. spretus
CROSS Data
MC #mice Pax1 Foxa2 Hck Src Ada Hnf4a
29 b b b b b b
43 s s s s s s
4 s b b b b b
0 b s s s s s
0 s s b b b b
2 b b s s s s
0 s s s b b b
0 b b b s s s
1 s s s s b b
2 b b b b s s
Additional Mice Typed Only for Specific Pairs of Loci
Marker 1 Marker 2 # Recombinants # Parentals
Pax1 Foxa2 0 48
Foxa2 Hck 1 29
Hck Src 6 63
Src Ada 1 68
Ada Hnf4a 0 37
Statistics
Marker 1 Marker 2 # Recombinants Total % Recombinants Std Error
Pax1 Foxa2 4 129 3.101 1.526
Foxa2 Hck 3 111 2.703 1.539
Hck Src 6 150 4.000 1.600
Src Ada 4 150 2.667 1.315
Ada Hnf4a 0 118 0.000 0.000

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
08/04/2020
MGI 6.15
The Jackson Laboratory