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Mapping Data
Experiment
  • Experiment
    CROSS
  • Chromosome
    7
  • Reference
    J:10993 Saunders AM, et al., A molecular genetic linkage map of mouse chromosome 7. Genomics. 1990 Nov;8(3):525-35
  • ID
    MGI:40067
Genes
GeneAlleleAssay TypeDescription
Prkcg Southern analysis phPKC-(gamma)6
Apoe Southern analysis p2CL
Atp1a3 Southern analysis pA1
Ckm Southern analysis pJN2CK-M
D7H19S19 Southern analysis p17.4-4(2)
Ercc2 Southern analysis pKER2
Xrcc1 Southern analysis XP1-30
Pou2f2 Southern analysis Puc-3-1
Cyp2a Southern analysis P450-IIA3
Cyp2b Southern analysis pP-450b-5
Rip Southern analysis pf3
Tgfb1 Southern analysis pMUR(beta)2
D7H19F11S1 Southern analysis OL5
Gpi1 Southern analysis HS-10
Mag Southern analysis 5Mag
Notes
  • Reference
    This paper follows the Rip locus using a probe identifying Cyp2b10. Revised gene symbols: Atp1a3, Tgfb1, Snrp70, Snrp2a, Emv23, D7H19S19 and D7H19F11S1 (formerly Atpa-2, Tgfb, Rnu1p70, Rnu2pa, C58v-4, D19S19h and D19F11S1 respectively). Authors use Pkcg for Pkcc.
CROSS
  • Type
    Backcross, female
  • Female Parent
    <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
  • Strain
    (C3H/HeJ-Fasl x M. spretus)F1
  • Male Parent
    <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>/<c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>
  • Strain
    C3H/HeJ-Fasl/J
  • Mapping Panel
    Seldin
  • Allele 1
    c from C3H/HeJ-Fasl/J
  • Allele 2
    s from M. spretus
CROSS Data
MC #mice Prkcg Apoe Atp1a3 Ckm D7H19S19 Ercc2 Xrcc1 Pou2f2 Cyp2a Rip Tgfb1 D7H19F11S1 Gpi1 Mag
78 c c c c c c c c c c c c c c c
123 s s s s s s s s s s s s s s s
1 c s s s s s s s s s s s s s s
1 s c c c c c c c c c c c c c c
1 s s s s s s c c c c c c c c c
1 s s s s s s s c c c c c c c c
2 s s s s s s s s c c c c c c c
1 c c c c c c c c c c c c s s s
6 s s s s s s s s s s s s c c c
2 c c c c c c c c c c c c c s s
3 s s s s s s s s s s s s s c c
Statistics
Marker 1 Marker 2 # Recombinants Total % Recombinants Std Error
Prkcg Apoe 2 219 0.913 0.643
Apoe Atp1a3 0 219 0.000 0.000
Atp1a3 Ckm 0 219 0.000 0.000
Ckm D7H19S19 0 219 0.000 0.000
D7H19S19 Ercc2 0 219 0.000 0.000
Ercc2 Xrcc1 1 219 0.457 0.456
Xrcc1 Pou2f2 1 219 0.457 0.456
Pou2f2 Cyp2a 2 219 0.913 0.643
Rip Tgfb1 0 219 0.000 0.000
Tgfb1 D7H19F11S1 7 219 3.196 1.189
D7H19F11S1 Gpi1 5 219 2.283 1.009
Gpi1 Mag 0 219 0.000 0.000

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
04/06/2021
MGI 6.16
The Jackson Laboratory