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Mapping Data
Experiment
  • Experiment
    CROSS
  • Chromosome
    2
  • Reference
    J:9913 Siracusa LD, et al., Recombinant inbred strain and interspecific backcross analysis of molecular markers flanking the murine agouti coat color locus. Genetics. 1989 Jul;122(3):669-79
  • ID
    MGI:39191
Genes
GeneAlleleAssay TypeDescription
B2m Southern analysis g2B2mdIIIB
Il1a Southern analysis pIL1-1301
Hck Southern analysis pHK24
Emv13 Southern analysis pEmv-13 Sst probe
Bpifa2 Southern analysis HhaI-Psp probe
a reported elsewhere
Emv15 reported elsewhere
Src Southern analysis pN1.8
Ada Southern analysis pADA5-29
Svs5 Southern analysis pSV-008
Pck1 Southern analysis pPCK10
Notes
  • Reference
    Revised gene symbols: Emv13, Hck and Lck (formerly Akv-3, Hck-1 and Hck-3 respectively).
  • Experiment
    Offspring types indicate alleles inherited from F1 parent.
CROSS
  • Type
    Backcross, female
  • Female Parent
    <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
  • Strain
    (C57BL/6J x M. spretus)F1
  • Male Parent
    <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>
  • Strain
    C57BL/6J
  • Mapping Panel
  • Allele 1
    b from C57BL/6J
  • Allele 2
    s from M. spretus
CROSS Data
MC #mice B2m Il1a Hck Emv13 Bpifa2 a Emv15 Src Ada Svs5 Pck1
64 s s s s s s s s s s s
37 b b b b b b b b b b b
2 s b b b b b b b b b b
3 b s s s s s s s s s s
13 s s b b b b b b b b b
10 b b s s s s s s s s s
1 s s s b b b b b b b b
0 b b b s s s s s s s s
2 s s s s s b b b b b b
1 b b b b b s s s s s s
0 s s s s s s b b b b b
1 b b b b b b s s s s s
1 s s s s s s s b b b b
0 b b b b b b b s s s s
1 s s s s s s s s b b b
3 b b b b b b b b s s s
10 s s s s s s s s s s b
1 b b b b b b b b b b s
Statistics
Marker 1 Marker 2 # Recombinants Total % Recombinants Std Error
B2m Il1a 5 150 3.333 1.466
Il1a Hck 23 150 15.333 2.942
Hck Emv13 1 150 0.667 0.664
Emv13 Bpifa2 0 150 0.000 0.000
Bpifa2 a 3 150 2.000 1.143
a Emv15 1 150 0.667 0.664
Emv15 Src 1 150 0.667 0.664
Src Ada 4 150 2.667 1.315
Ada Svs5 0 150 0.000 0.000
Svs5 Pck1 11 150 7.333 2.128

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
08/04/2020
MGI 6.15
The Jackson Laboratory