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Mapping Data
Experiment
  • Experiment
    CROSS
  • Chromosome
    6
  • Reference
    J:101423 Carter M, et al., Crooked tail (Cd) model of human folate-responsive neural tube defects is mutated in Wnt coreceptor lipoprotein receptor-related protein 6. Proc Natl Acad Sci U S A. 2005 Sep 6;102(36):12843-8
  • ID
    MGI:3604451
Genes
GeneAlleleAssay TypeDescription
D6Mit132 PCR amplified length variant
D6Mit36 PCR amplified length variant
D6Mit329 PCR amplified length variant
D6Mit55 PCR amplified length variant
D6Mit115 PCR amplified length variant
D6Mit300 PCR amplified length variant
D6Mit217 PCR amplified length variant
Ms6hm3 PCR amplified length variant
D6Mit336 PCR amplified length variant
D6Mit335 PCR amplified length variant
D6Mit218 PCR amplified length variant
D6Mit52 PCR amplified length variant
D6Mit194 PCR amplified length variant
D6Mit135 PCR amplified length variant
D6Mit289 PCR amplified length variant
D6Mit13 PCR amplified length variant
D6Mit219a PCR amplified length variant, direct sequencing
D6Mit111 PCR amplified length variant
Lrp6 visible phenotype Lrp6
Gprc5a SNP Rai3
D6Mit301 PCR amplified length variant
D6Mit163 PCR amplified length variant
D6Mit302 PCR amplified length variant
D6Mit295 PCR amplified length variant
D6Mit294 PCR amplified length variant
Notes
  • Reference
    The genetic mapping of the Cd mutation enabled the authors to identify genes within a physical genomic range as potential candidates for Crooked tail.
    The authors identified a mutation in Lpr6 as causitive of the Cd phenotype.
CROSS
  • Type
    Backcross, sexes unspecified or combined
  • Female Parent
    <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>/<d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d>
  • Strain
    Not Specified
  • Male Parent
    <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d>/<d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d>
  • Strain
    A/J
  • Allele 1
    c from Not Specified
  • Allele 2
    d from Not Specified
CROSS Data
MC #mice D6Mit132 D6Mit36 D6Mit329 D6Mit55 D6Mit115 D6Mit300 D6Mit217 Ms6hm3 D6Mit336 D6Mit335 D6Mit218 D6Mit52 D6Mit194 D6Mit135 D6Mit289 D6Mit13 D6Mit219a D6Mit111 Lrp6 Gprc5a D6Mit301 D6Mit163 D6Mit302 D6Mit295 D6Mit294
154 d c c c c c c c c c c c c c c c c c c c c c c c c
110 d d c c c c c c c c c c c c c c c c c c c c c c c
75 d d d c c c c c c c c c c c c c c c c c c c c c c
74 d d d d c c c c c c c c c c c c c c c c c c c c c
69 d d d d d c c c c c c c c c c c c c c c c c c c c
44 d d d d d d c c c c c c c c c c c c c c c c c c c
33 d d d d d d d c c c c c c c c c c c c c c c c c c
32 d d d d d d d d c c c c c c c c c c c c c c c c c
31 d d d d d d d d d c c c c c c c c c c c c c c c c
20 d d d d d d d d d d c c c c c c c c c c c c c c c
17 d d d d d d d d d d d c c c c c c c c c c c c c c
15 d d d d d d d d d d d d c c c c c c c c c c c c c
12 d d d d d d d d d d d d d c c c c c c c c c c c c
10 d d d d d d d d d d d d d d c c c c c c c c c c c
9 d d d d d d d d d d d d d d d c c c c c c c c c c
5 d d d d d d d d d d d d d d d d c c c c c c c c c
4 d d d d d d d d d d d d d d d d d c c c c c c c c
2 d d d d d d d d d d d d d d d d d d c c c c c c c
2 c c c c c c c c c c c c c c c c c c c c d d d d d
10 c c c c c c c c c c c c c c c c c c c c c d d d d
29 c c c c c c c c c c c c c c c c c c c c c c d d d
31 c c c c c c c c c c c c c c c c c c c c c c c d d
123 c c c c c c c c c c c c c c c c c c c c c c c c d
132 c c c c c c c c c c c c c c c c c c c c c c c c c
Statistics
Marker 1 Marker 2 # Recombinants Total % Recombinants Std Error
D6Mit132 D6Mit36 154 1043 14.765 1.098
D6Mit36 D6Mit329 110 1043 10.546 0.951
D6Mit329 D6Mit55 75 1043 7.191 0.800
D6Mit55 D6Mit115 74 1043 7.095 0.795
D6Mit115 D6Mit300 69 1043 6.616 0.770
D6Mit300 D6Mit217 44 1043 4.219 0.622
D6Mit217 Ms6hm3 33 1043 3.164 0.542
Ms6hm3 D6Mit336 32 1043 3.068 0.534
D6Mit336 D6Mit335 31 1043 2.972 0.526
D6Mit335 D6Mit218 20 1043 1.918 0.425
D6Mit218 D6Mit52 17 1043 1.630 0.392
D6Mit52 D6Mit194 15 1043 1.438 0.369
D6Mit194 D6Mit135 12 1043 1.151 0.330
D6Mit135 D6Mit289 10 1043 0.959 0.302
D6Mit289 D6Mit13 9 1043 0.863 0.286
D6Mit13 D6Mit219a 5 1043 0.479 0.214
D6Mit219a D6Mit111 4 1043 0.384 0.191
D6Mit111 Lrp6 2 1043 0.192 0.135
Lrp6 Gprc5a 0 1043 0.000 0.000
Gprc5a D6Mit301 2 1043 0.192 0.135
D6Mit301 D6Mit163 10 1043 0.959 0.302
D6Mit163 D6Mit302 29 1043 2.780 0.509
D6Mit302 D6Mit295 31 1043 2.972 0.526
D6Mit295 D6Mit294 123 1043 11.793 0.999

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
04/06/2021
MGI 6.16
The Jackson Laboratory