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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TAP1 HGNC:43 (HGNC)
6890 (Entrez Gene)
170260 (OMIM)
TAP1 (MyGene.info)
TAP1 (Alliance of Genome Resources)
Chr6 p21.32 Chr6:32845209-32853971 (-)
GRCh38.p7
MHC class I deficiency
Q03518 (UniProt | EBI)
NM_001292022 (RefSeq)
mouse Tap1 MGI:98483 (MGI)
21354 (Entrez Gene)
Gene Tree
Tap1 (Alliance of Genome Resources)
Chr17 17.98 cM Chr17:34406530-34416199 (+)
GRCm39
21354 (NCBI Gene Model)
P21958 (UniProt | EBI)
NM_013683 (RefSeq)
rat Tap1 RGD:3817 (Rat Genome Database)
24811 (Entrez Gene)
Tap1 (Alliance of Genome Resources)
Chr20 p12 P36370 (UniProt | EBI)
NM_032055 (RefSeq)
zebrafish tap1 ZDB-GENE-050517-43 (Zebrafish Model Organism Database)
100333043 (Entrez Gene)
tap1 (Alliance of Genome Resources)
Chr16 XP_002665053 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
11/30/2021
MGI 6.17
The Jackson Laboratory