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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SPTAN1 HGNC:11273 (HGNC)
6709 (Entrez Gene)
182810 (OMIM)
SPTAN1 (Alliance of Genome Resources)
Chr9 q34.11 Chr9:128552558-128633662 (+)
GRCh38
developmental and epileptic encephalopathy 5
Q13813 (UniProt | EBI)
NM_001375314 (RefSeq)
mouse Sptan1 MGI:98386 (MGI)
20740 (Entrez Gene)
Gene Tree
Sptan1 (Alliance of Genome Resources)
Chr2 20.93 cM Chr2:29855572-29921463 (+)
GRCm39
20740 (NCBI Gene Model)
P16546 (UniProt | EBI)
NM_001309460 (RefSeq)
rat Sptan1 RGD:621714 (Rat Genome Database)
64159 (Entrez Gene)
Sptan1 (Alliance of Genome Resources)
Chr3 p12 P16086 (UniProt | EBI)
NM_171983 (RefSeq)
zebrafish sptan1 ZDB-GENE-051113-60 (Zebrafish Model Organism Database)
553383 (Entrez Gene)
sptan1 (Alliance of Genome Resources)
Chr21 NP_001091958 (RefSeq)
NM_001098488 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/19/2024
MGI 6.23
The Jackson Laboratory