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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RAP1A HGNC:9855 (HGNC)
5906 (Entrez Gene)
179520 (OMIM)
RAP1A (Alliance of Genome Resources)
Chr1 p13.2 Chr1:111542009-111716691 (+)
GRCh38
P62834 (UniProt | EBI)
NM_001394066 (RefSeq)
mouse Rap1a MGI:97852 (MGI)
109905 (Entrez Gene)
Gene Tree
Rap1a (Alliance of Genome Resources)
Chr3 46.45 cM Chr3:105634583-105708652 (-)
GRCm39
ENSMUSG00000068798 (Ensembl Gene Model)
ENSMUSP00000088174 (Ensembl)
ENSMUST00000090678 (Ensembl)
rat Rap1a RGD:1359694 (Rat Genome Database)
295347 (Entrez Gene)
Rap1a (Alliance of Genome Resources)
Chr2 q34 P62836 (UniProt | EBI)
NM_001005765 (RefSeq)
zebrafish rap1aa ZDB-GENE-040625-167 (Zebrafish Model Organism Database)
415242 (Entrez Gene)
rap1aa (Alliance of Genome Resources)
Chr8 NP_001002152 (RefSeq)
NM_001002152 (RefSeq)
rap1ab ZDB-GENE-040426-2738 (Zebrafish Model Organism Database)
406714 (Entrez Gene)
rap1ab (Alliance of Genome Resources)
Chr11 NP_998570 (RefSeq)
NM_001243179 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/30/2024
MGI 6.23
The Jackson Laboratory