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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HMGCR HGNC:5006 (HGNC)
3156 (Entrez Gene)
142910 (OMIM)
HMGCR (Alliance of Genome Resources)
Chr5 q13.3 Chr5:75336329-75364001 (+)
GRCh38
Alzheimer's disease
asthma
attention deficit hyperactivity disorder
autosomal recessive limb-girdle muscular dystrophy
coronary artery disease
dementia
diabetes mellitus
intermediate coronary syndrome
muscular disease
Parkinson's disease
type 2 diabetes mellitus
P04035 (UniProt | EBI)
NM_000859 (RefSeq)
mouse Hmgcr MGI:96159 (MGI)
15357 (Entrez Gene)
Gene Tree
Hmgcr (Alliance of Genome Resources)
Chr13 50.65 cM Chr13:96785475-96807444 (-)
GRCm39
ENSMUSG00000021670 (Ensembl Gene Model)
ENSMUSP00000022176 (Ensembl)
ENSMUST00000022176 (Ensembl)
rat Hmgcr RGD:2803 (Rat Genome Database)
25675 (Entrez Gene)
Hmgcr (Alliance of Genome Resources)
Chr2 q12 P51639 (UniProt | EBI)
NM_013134 (RefSeq)
zebrafish hmgcra ZDB-GENE-040401-2 (Zebrafish Model Organism Database)
559054 (Entrez Gene)
hmgcra (Alliance of Genome Resources)
Chr5 NP_001073446 (RefSeq)
NM_001126459 (RefSeq)
hmgcrb ZDB-GENE-051108-1 (Zebrafish Model Organism Database)
541479 (Entrez Gene)
hmgcrb (Alliance of Genome Resources)
Chr21 NP_001014314 (RefSeq)
NM_001014292 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory