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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human GCH1 HGNC:4193 (HGNC)
2643 (Entrez Gene)
600225 (OMIM)
GCH1 (Alliance of Genome Resources)
Chr14 q22.2 Chr14:54842008-54902826 (-)
GRCh38
BH4-deficient hyperphenylalaninemia B
bipolar disorder
cerebral infarction
diabetic angiopathy
dystonia
dystonia 5
hypertension
Parkinsonism
sickle cell anemia
type 2 diabetes mellitus
P30793 (UniProt | EBI)
NM_001424104 (RefSeq)
mouse Gch1 MGI:95675 (MGI)
14528 (Entrez Gene)
Gene Tree
Gch1 (Alliance of Genome Resources)
Chr14 24.6 cM Chr14:47391352-47426870 (-)
GRCm39
BH4-deficient hyperphenylalaninemia B
14528 (NCBI Gene Model)
Q05915 (UniProt | EBI)
NM_008102 (RefSeq)
rat Gch1 RGD:61992 (Rat Genome Database)
29244 (Entrez Gene)
Gch1 (Alliance of Genome Resources)
Chr15 p14 P22288 (UniProt | EBI)
NM_024356 (RefSeq)
zebrafish gch1 ZDB-GENE-070720-5 (Zebrafish Model Organism Database)
100192219 (Entrez Gene)
gch1 (Alliance of Genome Resources)
Chr17 NP_001129727 (RefSeq)
NM_001136255 (RefSeq)
gch2 ZDB-GENE-001205-3 (Zebrafish Model Organism Database)
64263 (Entrez Gene)
gch2 (Alliance of Genome Resources)
Chr12 NP_571742 (RefSeq)
NM_131667 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory