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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SMAD4 HGNC:6770 (HGNC)
4089 (Entrez Gene)
600993 (OMIM)
SMAD4 (Alliance of Genome Resources)
Chr18 q21.2 Chr18:51028528-51085045 (+)
GRCh38
aortic disease
endometrial carcinoma
gastrointestinal system cancer
hereditary hemorrhagic telangiectasia
juvenile polyposis-hereditary hemorrhagic telangiectasia syndrome
juvenile polyposis syndrome
Lynch syndrome
ovarian cancer
pancreatic cancer
seminoma
Q13485 (UniProt | EBI)
NM_001407043 (RefSeq)
mouse Smad4 MGI:894293 (MGI)
17128 (Entrez Gene)
Gene Tree
Smad4 (Alliance of Genome Resources)
Chr18 49.51 cM Chr18:73772080-73836851 (-)
GRCm39
juvenile polyposis syndrome
osteogenesis imperfecta
ENSMUSG00000024515 (Ensembl Gene Model)
ENSMUSP00000025393 (Ensembl)
ENSMUST00000025393 (Ensembl)
rat Smad4 RGD:3033 (Rat Genome Database)
50554 (Entrez Gene)
Smad4 (Alliance of Genome Resources)
Chr18 q12.2 O70437 (UniProt | EBI)
NM_019275 (RefSeq)
zebrafish smad4a ZDB-GENE-990603-8 (Zebrafish Model Organism Database)
559111 (Entrez Gene)
smad4a (Alliance of Genome Resources)
Chr10 NP_001116172 (RefSeq)
NM_001114912 (RefSeq)
smad4b ZDB-GENE-060130-140 (Zebrafish Model Organism Database)
794669 (Entrez Gene)
smad4b (Alliance of Genome Resources)
Chr5 XP_021327242 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory