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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
22547

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human COL11A2 HGNC:2187 (HGNC)
1302 (Entrez Gene)
120290 (OMIM)
Chr6 p21.3 Chr6:33162692-33192468 (-)
GRCh38
Deafness, Autosomal Dominant 13; DFNA13
Deafness, Autosomal Recessive 53; DFNB53
Fibrochondrogenesis 2; FBCG2
Otospondylomegaepiphyseal Dysplasia; OSMED
Stickler Syndrome, Type III; STL3
Weissenbacher-Zweymuller Syndrome; WZS
P13942 (UniProt | EBI)
NM_080679 (RefSeq)
mouse Col11a2 MGI:88447 (MGI)
12815 (Entrez Gene)
Gene Tree
VISTA-Point
Chr17 17.98 cM Chr17:34039437-34066685 (+)
GRCm38
Deafness, Autosomal Dominant 13; DFNA13
Otospondylomegaepiphyseal Dysplasia; OSMED
Stickler Syndrome, Type III; STL3
OTTMUSG00000022512 (VEGA)
OTTMUSP00000025657 (VEGA)
OTTMUST00000053896 (VEGA)
rat Col11a2 294279 (Entrez Gene)
Chr20 NP_997693 (RefSeq)
NM_212528 (RefSeq)
rhesus macaque COL11A2 718050 (Entrez Gene)
Chr4 XP_002808428 (RefSeq)
cattle COL11A2 515435 (Entrez Gene)
Chr23 Q32S24 (UniProt | EBI)
NM_001046199 (RefSeq)
dog COL11A2 481734 (Entrez Gene)
Chr12 XP_538855 (RefSeq)
zebrafish col11a2 561679 (Entrez Gene)
Chr19 NP_001073461 (RefSeq)
NM_001079992 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/11/2014
MGI 5.20
The Jackson Laboratory