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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CDH3 HGNC:1762 (HGNC)
1001 (Entrez Gene)
114021 (OMIM)
CDH3 (Alliance of Genome Resources)
Chr16 q22.1 Chr16:68636189-68733771 (+)
GRCh38
congenital hypotrichosis with juvenile macular dystrophy
ectodermal dysplasia, ectrodactyly, and macular dystrophy syndrome
P22223 (UniProt | EBI)
NM_001317195 (RefSeq)
mouse Cdh3 MGI:88356 (MGI)
12560 (Entrez Gene)
Gene Tree
Cdh3 (Alliance of Genome Resources)
Chr8 53.16 cM Chr8:107237484-107283543 (+)
GRCm39
12560 (NCBI Gene Model)
P10287 (UniProt | EBI)
NM_001037809 (RefSeq)
rat Cdh3 RGD:621089 (Rat Genome Database)
116777 (Entrez Gene)
Cdh3 (Alliance of Genome Resources)
Chr19 q12 NP_446390 (RefSeq)
NM_053938 (RefSeq)
zebrafish cdh1 ZDB-GENE-010606-1 (Zebrafish Model Organism Database)
114424 (Entrez Gene)
cdh1 (Alliance of Genome Resources)
Chr7 NP_571895 (RefSeq)
NM_131820 (RefSeq)
cdh28 ZDB-GENE-081104-9 (Zebrafish Model Organism Database)
108179109 (Entrez Gene)
cdh28 (Alliance of Genome Resources)
Chr7 XP_017212586 (RefSeq)
cdh31 ZDB-GENE-110407-4 (Zebrafish Model Organism Database)
567602 (Entrez Gene)
cdh31 (Alliance of Genome Resources)
Chr7 XP_017212590 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory