CAPN1 Vertebrate HGNC

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Vertebrate Homology

Source

Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
- human
- mouse
- rat
- zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 04/30/2024 MGI 6.23

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences select all deselect all Go
human	CAPN1	HGNC:1476 (HGNC) 823 (Entrez Gene) 114220 (OMIM) CAPN1 (Alliance of Genome Resources)	Chr11 q13.1	Chr11:65180566-65212006 (+) GRCh38	hereditary spastic paraplegia 76	P07384 (UniProt \| EBI) NM_001198869 (RefSeq)
mouse	Capn1	MGI:88263 (MGI) 12333 (Entrez Gene) Gene Tree Capn1 (Alliance of Genome Resources)	Chr19 4.34 cM	Chr19:6038573-6065855 (-) GRCm39		12333 (NCBI Gene Model) O35350 (UniProt \| EBI) NM_007600 (RefSeq)
rat	Capn1	RGD:2267 (Rat Genome Database) 29153 (Entrez Gene) Capn1 (Alliance of Genome Resources)	Chr1 q43			P97571 (UniProt \| EBI) NM_019152 (RefSeq)
zebrafish	capn1	ZDB-GENE-040426-2814 (Zebrafish Model Organism Database) 406768 (Entrez Gene) capn1 (Alliance of Genome Resources)	Chr7			NP_998624 (RefSeq) NM_213459 (RefSeq)
	capn1a	ZDB-GENE-040426-1263 (Zebrafish Model Organism Database) 393417 (Entrez Gene) capn1a (Alliance of Genome Resources)	Chr13			NP_956739 (RefSeq) NM_200445 (RefSeq)
	capn1b	ZDB-GENE-060503-491 (Zebrafish Model Organism Database) 565106 (Entrez Gene) capn1b (Alliance of Genome Resources)	Chr22			NP_001138267 (RefSeq) NM_001144795 (RefSeq)
	si:dkeyp-50d11.2	ZDB-GENE-091113-22 (Zebrafish Model Organism Database) 565825 (Entrez Gene) si:dkeyp-50d11.2 (Alliance of Genome Resources)	Chr21			XP_009293787 (RefSeq)