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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PCDHGA12 HGNC:8699 (HGNC)
26025 (Entrez Gene)
603059 (OMIM)
PCDHGA12 (MyGene.info)
PCDHGA12 (Alliance of Genome Resources)
Chr5 q31.3 Chr5:141430591-141512979 (+)
GRCh38.p7
O60330 (UniProt | EBI)
NM_003735 (RefSeq)
mouse Pcdhga12 MGI:1935229 (MGI)
93724 (Entrez Gene)
Gene Tree
Pcdhga12 (Alliance of Genome Resources)
Chr18 19.63 cM Chr18:37898633-37974926 (+)
GRCm39
93724 (NCBI Gene Model)
NP_291073 (RefSeq)
NM_033595 (RefSeq)
zebrafish si:ch73-233f7.1 ZDB-GENE-141215-5 (Zebrafish Model Organism Database)
100537710 (Entrez Gene)
si:ch73-233f7.1 (Alliance of Genome Resources)
Chr14 NP_001352109 (RefSeq)
NM_001365181 (RefSeq)
si:ch73-233f7.3 ZDB-GENE-141215-57 (Zebrafish Model Organism Database)
108192078 (Entrez Gene)
si:ch73-233f7.3 (Alliance of Genome Resources)
Chr14 XP_017214523 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
11/30/2021
MGI 6.17
The Jackson Laboratory