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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC6A19 HGNC:27960 (HGNC)
340024 (Entrez Gene)
608893 (OMIM)
SLC6A19 (Alliance of Genome Resources)
Chr5 p15.33 Chr5:1201595-1225111 (+)
GRCh38
Hartnup disease
Q695T7 (UniProt | EBI)
NM_001003841 (RefSeq)
mouse Slc6a19 MGI:1921588 (MGI)
74338 (Entrez Gene)
Gene Tree
Slc6a19 (Alliance of Genome Resources)
Chr13 40.14 cM Chr13:73827864-73848899 (-)
GRCm39
Hartnup disease
74338 (NCBI Gene Model)
Q9D687 (UniProt | EBI)
NM_028878 (RefSeq)
rat Slc6a19 RGD:1594328 (Rat Genome Database)
664630 (Entrez Gene)
Slc6a19 (Alliance of Genome Resources)
Chr1 p11 Q2A865 (UniProt | EBI)
NM_001039722 (RefSeq)
zebrafish slc6a19a.1 ZDB-GENE-070620-2 (Zebrafish Model Organism Database)
553256 (Entrez Gene)
slc6a19a.1 (Alliance of Genome Resources)
Chr19 NP_001091648 (RefSeq)
NM_001098178 (RefSeq)
slc6a19a.2 ZDB-GENE-141210-16 (Zebrafish Model Organism Database)
100334171 (Entrez Gene)
slc6a19a.2 (Alliance of Genome Resources)
Chr19 XP_002665492 (RefSeq)
slc6a19b ZDB-GENE-030131-4755 (Zebrafish Model Organism Database)
326030 (Entrez Gene)
slc6a19b (Alliance of Genome Resources)
Chr16 NP_956030 (RefSeq)
NM_199736 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/30/2024
MGI 6.23
The Jackson Laboratory