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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1166

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HCRT HGNC:4847 (HGNC)
3060 (Entrez Gene)
602358 (OMIM)
Chr17 q21 Chr17:42184060-42185452 (-)
GRCh38
Narcolepsy 1; NRCLP1
O43612 (UniProt | EBI)
NM_001524 (RefSeq)
mouse Hcrt MGI:1202306 (MGI)
15171 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 63.6 cM Chr11:100761069-100762931 (-)
GRCm38
Narcolepsy 1; NRCLP1
OTTMUSG00000002123 (VEGA)
OTTMUSP00000002040 (VEGA)
OTTMUST00000004304 (VEGA)
rat HcRt 25723 (Entrez Gene)
Chr10 q32.1 O55232 (UniProt | EBI)
NM_013179 (RefSeq)
chimpanzee HCRT 742546 (Entrez Gene)
Chr17 XP_001166578 (RefSeq)
rhesus macaque HCRT 709564 (Entrez Gene)
Chr16 NP_001181361 (RefSeq)
NM_001194432 (RefSeq)
cattle HCRT 281222 (Entrez Gene)
Chr19 P56717 (UniProt | EBI)
NM_001166520 (RefSeq)
dog HCRT 607641 (Entrez Gene)
Chr9 Q9GLF6 (UniProt | EBI)
NM_001033994 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory