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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CST3 HGNC:2475 (HGNC)
1471 (Entrez Gene)
604312 (OMIM)
CST3 (Alliance of Genome Resources)
Chr20 p11.21 Chr20:23626706-23638473 (-)
GRCh38
age related macular degeneration 11
CST3-related cerebral amyloid angiopathy
P01034 (UniProt | EBI)
NM_000099 (RefSeq)
mouse Cst3 MGI:102519 (MGI)
13010 (Entrez Gene)
Gene Tree
Cst3 (Alliance of Genome Resources)
Chr2 73.6 cM Chr2:148713642-148717432 (-)
GRCm39
13010 (NCBI Gene Model)
P21460 (UniProt | EBI)
NM_009976 (RefSeq)
rat Cst3 RGD:2432 (Rat Genome Database)
25307 (Entrez Gene)
Cst3 (Alliance of Genome Resources)
Chr3 q41 P14841 (UniProt | EBI)
NM_012837 (RefSeq)
zebrafish cst3 ZDB-GENE-030131-373 (Zebrafish Model Organism Database)
791878 (Entrez Gene)
cst3 (Alliance of Genome Resources)
Chr13 NP_001026843 (RefSeq)
NM_001031673 (RefSeq)
zgc:163030 ZDB-GENE-060810-77 (Zebrafish Model Organism Database)
566959 (Entrez Gene)
zgc:163030 (Alliance of Genome Resources)
Chr13 NP_001082882 (RefSeq)
NM_001089413 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory