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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TFDP1 HGNC:11749 (HGNC)
7027 (Entrez Gene)
189902 (OMIM)
TFDP1 (Alliance of Genome Resources)
Chr13 q34 Chr13:113584688-113641473 (+)
GRCh38
mismatch repair cancer syndrome
Q14186 (UniProt | EBI)
NM_007111 (RefSeq)
TFDP3 HGNC:24603 (HGNC)
51270 (Entrez Gene)
300772 (OMIM)
TFDP3 (Alliance of Genome Resources)
ChrX q26.2 ChrX:133216662-133218354 (-)
GRCh38
Q5H9I0 (UniProt | EBI)
NM_016521 (RefSeq)
mouse Tfdp1 MGI:101934 (MGI)
21781 (Entrez Gene)
Gene Tree
Tfdp1 (Alliance of Genome Resources)
Chr8 5.78 cM Chr8:13388751-13428448 (+)
GRCm39
ENSMUSG00000038482 (Ensembl Gene Model)
ENSMUSP00000147881 (Ensembl)
ENSMUST00000209885 (Ensembl)
rat Tfdp1 RGD:1560344 (Rat Genome Database)
361178 (Entrez Gene)
Tfdp1 (Alliance of Genome Resources)
Chr16 q12.5 NP_001020889 (RefSeq)
NM_001025718 (RefSeq)
zebrafish tfdp1a ZDB-GENE-040426-2883 (Zebrafish Model Organism Database)
406813 (Entrez Gene)
tfdp1a (Alliance of Genome Resources)
Chr9 NP_998657 (RefSeq)
NM_213492 (RefSeq)
tfdp1b ZDB-GENE-040426-1746 (Zebrafish Model Organism Database)
393749 (Entrez Gene)
tfdp1b (Alliance of Genome Resources)
Chr1 NP_957070 (RefSeq)
NM_200776 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory