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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human NKX2-2 HGNC:7835 (HGNC)
4821 (Entrez Gene)
604612 (OMIM)
NKX2-2 (Alliance of Genome Resources)
Chr20 p11.22 Chr20:21511017-21522689 (-)
GRCh38
O95096 (UniProt | EBI)
NM_002509 (RefSeq)
mouse Nkx2-2 MGI:97347 (MGI)
18088 (Entrez Gene)
Gene Tree
Nkx2-2 (Alliance of Genome Resources)
Chr2 72.63 cM Chr2:147019466-147036163 (-)
GRCm39
ENSMUSG00000027434 (Ensembl Gene Model)
ENSMUSP00000069666 (Ensembl)
ENSMUST00000067075 (Ensembl)
rat Nkx2-2 RGD:1308443 (Rat Genome Database)
366214 (Entrez Gene)
Nkx2-2 (Alliance of Genome Resources)
Chr3 q41 NP_001178833 (RefSeq)
NM_001191904 (RefSeq)
zebrafish nkx2.2a ZDB-GENE-980526-403 (Zebrafish Model Organism Database)
30697 (Entrez Gene)
nkx2.2a (Alliance of Genome Resources)
Chr17 Q90481 (UniProt | EBI)
NM_131422 (RefSeq)
nkx2.2b ZDB-GENE-050217-3 (Zebrafish Model Organism Database)
493627 (Entrez Gene)
nkx2.2b (Alliance of Genome Resources)
Chr20 NP_001007783 (RefSeq)
NM_001007782 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory