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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
16195

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SEMA6D HGNC:16770 (HGNC)
80031 (Entrez Gene)
609295 (OMIM)
Chr15 q21.1 Chr15:47184206-47774223 (+)
GRCh38
Q8NFY4 (UniProt | EBI)
NM_020858 (RefSeq)
mouse Sema6d MGI:2387661 (MGI)
214968 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 60.69 cM Chr2:124089969-124667770 (+)
GRCm38
OTTMUSG00000015256 (VEGA)
OTTMUSP00000016242 (VEGA)
OTTMUST00000036150 (VEGA)
rat Sema6d 311384 (Entrez Gene)
Chr3 q35 NP_001101238 (RefSeq)
NM_001107768 (RefSeq)
chimpanzee SEMA6D 467674 (Entrez Gene)
Chr15 XP_001164625 (RefSeq)
rhesus macaque SEMA6D 713885 (Entrez Gene)
Chr7 XP_001112236 (RefSeq)
cattle SEMA6D 518458 (Entrez Gene)
Chr10 NP_001178062 (RefSeq)
NM_001191133 (RefSeq)
dog SEMA6D 100855988 (Entrez Gene)
Chr30 XP_003640098 (RefSeq)
chicken SEMA6D 415430 (Entrez Gene)
Chr10 XP_001231859 (RefSeq)
western clawed frog sema6d 100145190 (Entrez Gene)
ChrUN NP_001120152 (RefSeq)
NM_001126680 (RefSeq)
zebrafish sema6dl 550377 (Entrez Gene)
Chr18 NP_001017682 (RefSeq)
NM_001017682 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory