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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
4400

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CACNA2D2 HGNC:1400 (HGNC)
9254 (Entrez Gene)
607082 (OMIM)
Chr3 p21.3 Chr3:50362799-50503461 (-)
GRCh38
Q9NY47 (UniProt | EBI)
NM_001005505 (RefSeq)
mouse Cacna2d2 MGI:1929813 (MGI)
56808 (Entrez Gene)
Gene Tree
VISTA-Point
Chr9 58.02 cM Chr9:107399612-107529346 (+)
GRCm38
Epilepsy, Idiopathic Generalized, Susceptibility to, 11; EIG11
OTTMUSG00000036844 (VEGA)
OTTMUSP00000052660 (VEGA)
OTTMUST00000094617 (VEGA)
rat Cacna2d2 300992 (Entrez Gene)
Chr8 q32 Q8CFG6 (UniProt | EBI)
NM_175592 (RefSeq)
chimpanzee CACNA2D2 460396 (Entrez Gene)
Chr3 XP_003309914 (RefSeq)
rhesus macaque CACNA2D2 702429 (Entrez Gene)
Chr2 XP_001090735 (RefSeq)
cattle CACNA2D2 785909 (Entrez Gene)
Chr22 XP_001253768 (RefSeq)
dog CACNA2D2 100688870 (Entrez Gene)
Chr20 XP_005632558 (RefSeq)
chicken CACNA2D2 430150 (Entrez Gene)
Chr12 XP_427707 (RefSeq)
zebrafish LOC100333639 100333639 (Entrez Gene)
Chr22 XP_002666248 (RefSeq)
si:ch211-11p18.4 568759 (Entrez Gene)
Chr22 NP_001082889 (RefSeq)
NM_001089420 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory