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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
568

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human AVPR1A HGNC:895 (HGNC)
552 (Entrez Gene)
600821 (OMIM)
Chr12 q14-q15 Chr12:63142287-63154191 (-)
GRCh38
P37288 (UniProt | EBI)
NM_000706 (RefSeq)
mouse Avpr1a MGI:1859216 (MGI)
54140 (Entrez Gene)
Gene Tree
VISTA-Point
Chr10 70.36 cM Chr10:122448499-122453453 (+)
GRCm38
Schizophrenia; SCZD
OTTMUSG00000020920 (VEGA)
OTTMUSP00000022915 (VEGA)
OTTMUST00000049450 (VEGA)
rat Avpr1a 25107 (Entrez Gene)
Chr7 q21 P30560 (UniProt | EBI)
NM_053019 (RefSeq)
chimpanzee AVPR1A 452038 (Entrez Gene)
Chr12 XP_003952184 (RefSeq)
rhesus macaque AVPR1A 717041 (Entrez Gene)
Chr11 XP_001116798 (RefSeq)
dog AVPR1A 481142 (Entrez Gene)
Chr10 NP_001185587 (RefSeq)
NM_001198658 (RefSeq)
chicken AVPR1A 771773 (Entrez Gene)
Chr1 NP_001103908 (RefSeq)
NM_001110438 (RefSeq)
western clawed frog avpr1a 100488869 (Entrez Gene)
ChrUN XP_002931664 (RefSeq)
zebrafish avpr1b 555939 (Entrez Gene)
Chr4 NP_001284605 (RefSeq)
NM_001297676 (RefSeq)
si:ch211-150f22.3 571591 (Entrez Gene)
Chr25 NP_001288043 (RefSeq)
NM_001301114 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory