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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
984

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CLCA1 HGNC:2015 (HGNC)
1179 (Entrez Gene)
603906 (OMIM)
Chr1 p22.3 Chr1:86468843-86500294 (+)
GRCh38
A8K7I4 (UniProt | EBI)
NM_001285 (RefSeq)
mouse Clca3 MGI:1346342 (MGI)
23844 (Entrez Gene)
Gene Tree
VISTA-Point
Chr3 69.26 cM Chr3:145004537-145032776 (-)
GRCm38
23844 (NCBI Gene Model)
Q9D7Z6 (UniProt | EBI)
NM_017474 (RefSeq)
rat Clca1 308015 (Entrez Gene)
Chr2 q44 NP_001100919 (RefSeq)
NM_001107449 (RefSeq)
chimpanzee CLCA1 456640 (Entrez Gene)
Chr1 XP_001143250 (RefSeq)
rhesus macaque CLCA1 574295 (Entrez Gene)
Chr1 Q6PT52 (UniProt | EBI)
NM_001032912 (RefSeq)
dog CLCA1 490178 (Entrez Gene)
Chr6 XP_547299 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory