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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
7924

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human S100A4 HGNC:10494 (HGNC)
6275 (Entrez Gene)
114210 (OMIM)
Chr1 q21 Chr1:153543619-153545806 (-)
GRCh38
P26447 (UniProt | EBI)
NM_002961 (RefSeq)
mouse S100a4 MGI:1330282 (MGI)
20198 (Entrez Gene)
Gene Tree
VISTA-Point
Chr3 39.27 cM Chr3:90603771-90606045 (+)
GRCm38
OTTMUSG00000022114 (VEGA)
OTTMUSP00000024898 (VEGA)
OTTMUST00000052492 (VEGA)
rat S100a4 24615 (Entrez Gene)
Chr2 q34 P05942 (UniProt | EBI)
NM_012618 (RefSeq)
chimpanzee S100A4 457320 (Entrez Gene)
Chr1 XP_001138744 (RefSeq)
rhesus macaque S100A4 715115 (Entrez Gene)
Chr1 XP_001110635 (RefSeq)
cattle S100A4 282343 (Entrez Gene)
Chr3 P35466 (UniProt | EBI)
NM_174595 (RefSeq)
dog S100A4 403787 (Entrez Gene)
Chr7 Q9TV56 (UniProt | EBI)
NM_001003161 (RefSeq)
chicken S100A4 101747315 (Entrez Gene)
Chr25 XP_004948276 (RefSeq)
zebrafish icn 336655 (Entrez Gene)
Chr16 NP_997926 (RefSeq)
NM_212761 (RefSeq)
icn2 100005083 (Entrez Gene)
Chr16 NP_001076426 (RefSeq)
NM_001082957 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory