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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
31024

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CASP9 HGNC:1511 (HGNC)
842 (Entrez Gene)
602234 (OMIM)
Chr1 p36.21 Chr1:15489723-15524912 (-)
GRCh38
P55211 (UniProt | EBI)
NM_001229 (RefSeq)
mouse Casp9 MGI:1277950 (MGI)
12371 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 74.75 cM Chr4:141793612-141815976 (+)
GRCm38
OTTMUSG00000009932 (VEGA)
OTTMUSP00000010525 (VEGA)
OTTMUST00000023070 (VEGA)
rat Casp9 58918 (Entrez Gene)
Chr5 q36 NP_113820 (RefSeq)
NM_031632 (RefSeq)
chimpanzee CASP9 456457 (Entrez Gene)
Chr1 XP_001149405 (RefSeq)
rhesus macaque CASP9 694544 (Entrez Gene)
Chr1 XP_001082859 (RefSeq)
cattle CASP9 100140945 (Entrez Gene)
Chr16 NP_001192433 (RefSeq)
NM_001205504 (RefSeq)
dog CASP9 487432 (Entrez Gene)
Chr2 NP_001026803 (RefSeq)
NM_001031633 (RefSeq)
chicken CASP9 426970 (Entrez Gene)
Chr21 XP_424580 (RefSeq)
zebrafish casp9 492763 (Entrez Gene)
Chr23 NP_001007405 (RefSeq)
NM_001007404 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory