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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
10153

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human AGPAT5 HGNC:20886 (HGNC)
55326 (Entrez Gene)
614796 (OMIM)
Chr8 p23.1 Chr8:6708357-6761503 (+)
GRCh38
Q9NUQ2 (UniProt | EBI)
NM_018361 (RefSeq)
mouse Agpat5 MGI:1196345 (MGI)
52123 (Entrez Gene)
Gene Tree
VISTA-Point
Chr8 10.3 cM Chr8:18846277-18891361 (+)
GRCm38
OTTMUSG00000030978 (VEGA)
OTTMUSP00000040427 (VEGA)
OTTMUST00000076712 (VEGA)
rat Agpat5 306582 (Entrez Gene)
Chr16 q12.5 NP_001128216 (RefSeq)
NM_001134744 (RefSeq)
chimpanzee AGPAT5 463969 (Entrez Gene)
Chr8 XP_519588 (RefSeq)
rhesus macaque AGPAT5 716847 (Entrez Gene)
Chr8 NP_001244762 (RefSeq)
NM_001257833 (RefSeq)
cattle AGPAT5 530414 (Entrez Gene)
Chr27 NP_001069400 (RefSeq)
NM_001075932 (RefSeq)
dog AGPAT5 100684122 (Entrez Gene)
Chr16 XP_005630113 (RefSeq)
chicken AGPAT5 421898 (Entrez Gene)
Chr3 XP_419916 (RefSeq)
western clawed frog agpat5 548718 (Entrez Gene)
ChrUN NP_001015964 (RefSeq)
NM_001015964 (RefSeq)
zebrafish agpat5 767778 (Entrez Gene)
Chr13 NP_001070213 (RefSeq)
NM_001076745 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/11/2014
MGI 5.20
The Jackson Laboratory