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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
989

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human LDB2 HGNC:6533 (HGNC)
9079 (Entrez Gene)
603450 (OMIM)
Chr4 p16 Chr4:16501541-16898801 (-)
GRCh38
O43679 (UniProt | EBI)
NM_001290 (RefSeq)
mouse Ldb2 MGI:894670 (MGI)
16826 (Entrez Gene)
Gene Tree
VISTA-Point
Chr5 24.24 cM Chr5:44472133-44799707 (-)
GRCm38
16826 (NCBI Gene Model)
O55203 (UniProt | EBI)
NM_001286348 (RefSeq)
rat Ldb2 289664 (Entrez Gene)
Chr14 q21 NP_001099479 (RefSeq)
NM_001106009 (RefSeq)
chimpanzee LDB2 745631 (Entrez Gene)
Chr4 XP_001161726 (RefSeq)
rhesus macaque LDB2 714918 (Entrez Gene)
Chr5 NP_001252815 (RefSeq)
NM_001265886 (RefSeq)
cattle LDB2 617976 (Entrez Gene)
Chr6 NP_001040076 (RefSeq)
NM_001046611 (RefSeq)
dog LDB2 479084 (Entrez Gene)
Chr3 XP_536231 (RefSeq)
chicken LDB2 395631 (Entrez Gene)
Chr4 Q9W676 (UniProt | EBI)
NM_204829 (RefSeq)
western clawed frog ldb2 100491396 (Entrez Gene)
ChrUN XP_002938682 (RefSeq)
zebrafish ldb2a 30577 (Entrez Gene)
Chr14 NP_571389 (RefSeq)
NM_131314 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory