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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
81697

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human NPM1 HGNC:7910 (HGNC)
4869 (Entrez Gene)
164040 (OMIM)
Chr5 q35.1 Chr5:171387648-171410884 (+)
GRCh38
P06748 (UniProt | EBI)
NM_002520 (RefSeq)
mouse Npm1 MGI:106184 (MGI)
18148 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 19.21 cM Chr11:33152287-33163206 (-)
GRCm38
OTTMUSG00000005395 (VEGA)
OTTMUSP00000005572 (VEGA)
OTTMUST00000012025 (VEGA)
rat Npm1 25498 (Entrez Gene)
Chr10 q12 P13084 (UniProt | EBI)
NM_012992 (RefSeq)
chimpanzee NPM1 740704 (Entrez Gene)
Chr5 NP_001238905 (RefSeq)
NM_001251976 (RefSeq)
rhesus macaque LOC706883 706883 (Entrez Gene)
Chr6 XP_001095288 (RefSeq)
cattle NPM1 614028 (Entrez Gene)
Chr20 Q3T160 (UniProt | EBI)
NM_001035441 (RefSeq)
dog NPM1 479292 (Entrez Gene)
Chr4 NP_001239100 (RefSeq)
NM_001252171 (RefSeq)
chicken NPM1 396203 (Entrez Gene)
Chr13 P16039 (UniProt | EBI)
NM_205267 (RefSeq)
western clawed frog npm1 394478 (Entrez Gene)
ChrUN NP_988883 (RefSeq)
NM_203552 (RefSeq)
zebrafish npm1a 266985 (Entrez Gene)
Chr10 NP_955460 (RefSeq)
NM_199428 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory