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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ACTC1 HGNC:143 (HGNC)
70 (Entrez Gene)
102540 (OMIM)
ACTC1 (Alliance of Genome Resources)
Chr15 q14 Chr15:34790107-34795589 (-)
GRCh38
atrial heart septal defect 5
dilated cardiomyopathy
dilated cardiomyopathy 1R
hypertrophic cardiomyopathy 11
P68032 (UniProt | EBI)
NM_001406485 (RefSeq)
mouse Actc1 MGI:87905 (MGI)
11464 (Entrez Gene)
Gene Tree
Actc1 (Alliance of Genome Resources)
Chr2 57.55 cM Chr2:113877763-113883356 (-)
GRCm39
dilated cardiomyopathy 1R
11464 (NCBI Gene Model)
P68033 (UniProt | EBI)
NM_009608 (RefSeq)
rat Actc1 RGD:2026 (Rat Genome Database)
29275 (Entrez Gene)
Actc1 (Alliance of Genome Resources)
Chr3 q35 P68035 (UniProt | EBI)
NM_019183 (RefSeq)
zebrafish actc1a ZDB-GENE-040520-4 (Zebrafish Model Organism Database)
408256 (Entrez Gene)
actc1a (Alliance of Genome Resources)
Chr20 NP_001001409 (RefSeq)
NM_001001409 (RefSeq)
actc1b ZDB-GENE-000322-1 (Zebrafish Model Organism Database)
58114 (Entrez Gene)
actc1b (Alliance of Genome Resources)
Chr17 NP_571666 (RefSeq)
NM_131591 (RefSeq)
actc2 ZDB-GENE-040625-35 (Zebrafish Model Organism Database)
570210 (Entrez Gene)
actc2 (Alliance of Genome Resources)
Chr20 NP_001002066 (RefSeq)
NM_001002066 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory