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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5423529
Gene symbol: Agpat5
Gene name: 1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)
Probe: ES759 probe 766
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen ES759; Specimen S337: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_S337_1_5A
TS22: central nervous system Strong Regionally restricted Embryo_S337_1_5A
TS22: telencephalon Strong Regionally restricted Embryo_S337_1_5A
TS22: cerebral cortex Strong Ubiquitous Embryo_S337_1_4A
TS22: neocortex Moderate Ubiquitous Embryo_S337_1_4A
TS22: olfactory cortex Strong Ubiquitous Embryo_S337_1_4A
TS22: main olfactory bulb Strong Regionally restricted Embryo_S337_1_4A
TS22: piriform cortex Absent
TS22: hippocampus Strong Regionally restricted Embryo_S337_1_5A
TS22: basal ganglia Moderate Regionally restricted Embryo_S337_1_4B
TS22: corpus striatum Weak Regionally restricted Embryo_S337_1_3A Expression was weak in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Absent
TS22: amygdala Moderate Regionally restricted Embryo_S337_1_4B
TS22: telencephalon septum Moderate Regionally restricted Embryo_S337_1_5B
TS22: pallidum Moderate Regionally restricted Embryo_S337_1_5B Expression was detected in the pallidum (medial ganglionic eminence).
TS22: diencephalon Strong Regionally restricted Embryo_S337_1_5A
TS22: thalamus Strong Regionally restricted Embryo_S337_1_5A
TS22: hypothalamus Strong Regionally restricted Embryo_S337_1_5A
TS22: midbrain Moderate Regionally restricted Embryo_S337_1_5A
TS22: pretectum Moderate Regionally restricted Embryo_S337_1_5A
TS22: superior colliculus Moderate Regionally restricted Embryo_S337_1_4B
TS22: inferior colliculus Weak Regionally restricted Embryo_S337_1_4B
TS22: midbrain tegmentum Moderate Regionally restricted Embryo_S337_1_4A
TS22: hindbrain Strong Regionally restricted Embryo_S337_1_4A
TS22: cerebellum Weak Regionally restricted Embryo_S337_1_4C
TS22: pons Strong Regionally restricted Embryo_S337_1_4A
TS22: medulla oblongata Moderate Regionally restricted Embryo_S337_1_4A
TS22: spinal cord Weak Regionally restricted Embryo_S337_1_3B
TS22: choroid plexus Moderate Regionally restricted Embryo_S337_1_5C
TS22: meninges Absent
TS22: peripheral nervous system Strong Regionally restricted Embryo_S337_1_5B
TS22: cranial ganglion Strong Regionally restricted Embryo_S337_1_5B
TS22: dorsal root ganglion Weak Regionally restricted Embryo_S337_1_4B
TS22: eye Weak Regionally restricted Embryo_S337_1_2A
TS22: retina Weak Regionally restricted Embryo_S337_1_2A
TS22: lens Absent
TS22: cornea Absent
TS22: optic nerve Absent
TS22: nose Moderate Regionally restricted Embryo_S337_1_4A
TS22: olfactory epithelium Moderate Regionally restricted Embryo_S337_1_4A
TS22: ear Absent
TS22: inner ear Absent
TS22: cochlea Absent
TS22: inner ear labyrinth Absent
TS22: middle ear Absent
TS22: alimentary system Moderate Regionally restricted Embryo_S337_1_5A Expression was detected in the digestive system.
TS22: intestine Weak Regionally restricted Embryo_S337_1_5A
TS22: salivary gland Moderate Regionally restricted Embryo_S337_1_5A
TS22: tongue Weak Regionally restricted Embryo_S337_1_5A
TS22: tooth Absent
TS22: palatal shelf Absent
TS22: esophagus Absent
TS22: stomach Absent
TS22: liver Weak Regionally restricted Embryo_S337_1_5C
TS22: respiratory system Strong Scattered Embryo_S337_1_4C
TS22: pharynx Absent
TS22: larynx Absent
TS22: trachea Absent
TS22: main bronchus Absent
TS22: lung Strong Scattered Embryo_S337_1_4C
TS22: urinary system Moderate Regionally restricted Embryo_S337_1_4A Expression was detected in the genito-urinary system.
TS22: metanephros Weak Regionally restricted Embryo_S337_1_5A
TS22: ureter Absent
TS22: bladder Weak Regionally restricted Embryo_S337_1_4A
TS22: urethra Moderate Regionally restricted Embryo_S337_1_4A
TS22: reproductive system Weak Regionally restricted Embryo_S337_1_4A
TS22: genital tubercle Weak Regionally restricted Embryo_S337_1_4A
TS22: gonad Absent
TS22: gland Absent Expression was not detected in the endocrine system.
TS22: thyroid gland Absent
TS22: pituitary gland Absent
TS22: pancreas Absent
TS22: adrenal gland Absent
TS22: cardiovascular system Absent
TS22: heart Absent
TS22: heart atrium Absent
TS22: heart ventricle Absent
TS22: blood vessel Absent
TS22: hemolymphoid system Moderate Regionally restricted Embryo_S337_1_3B Expression was detected in the immune system.
TS22: spleen primordium Absent
TS22: thymus primordium Moderate Regionally restricted Embryo_S337_1_3B
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Absent
TS22: face Absent Expression was not detected in the face/soft tissues.
TS22: facial bone primordium Absent
TS22: cranium Absent Expression was not detected in the skull (base and vault).
TS22: axial skeleton Absent
TS22: tail Weak Regionally restricted Embryo_S337_1_4A
TS22: forelimb Absent
TS22: hindlimb Absent
TS22: integumental system Weak Regionally restricted Embryo_S337_1_3A
TS22: skin Absent
TS22: hair Weak Regionally restricted Embryo_S337_1_3A
TS22: vibrissa follicle Weak Regionally restricted Embryo_S337_1_3A Expression was weak in whisker follicle.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
06/23/2022
MGI 6.20
The Jackson Laboratory