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Gene Expression Data
Assay Details
Assay
Reference: J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
Assay type: RNA in situ
MGI Accession ID: MGI:4944905
Gene symbol: Ppfia4
Gene name: protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4
Probe: g00342
Probe preparation: Antisense RNA labelled with P33
Visualized with: Autoradiography
Results
Specimen g00342 E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: diencephalon Present Scattered g00342_sj_g18_051_e11 , g00342_sj_g18_001_e11
TS19: midbrain Present Scattered g00342_sj_g18_051_e11 , g00342_sj_g18_001_e11
TS19: hindbrain Present Scattered g00342_sj_g18_001_e11 , g00342_sj_g18_051_e11
TS19: future spinal cord Present Scattered g00342_sj_g18_001_e11 , g00342_sj_g18_051_e11
TS19: telencephalon Present Scattered g00342_sj_g18_001_e11 , g00342_sj_g18_051_e11

Specimen g00342 E15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cerebellum Present Widespread g00342_sj_g18_051_e15 , g00342_sj_g18_001_e15 , g00342_sj_g18_101_e15
TS23: ganglionic eminence Present Widespread g00342_sj_g18_101_e15 , g00342_sj_g18_051_e15 , g00342_sj_g18_001_e15
TS23: hindbrain Present Widespread g00342_sj_g18_101_e15 , g00342_sj_g18_051_e15 , g00342_sj_g18_001_e15
TS23: hippocampus Present Widespread g00342_sj_g18_101_e15 , g00342_sj_g18_001_e15 , g00342_sj_g18_051_e15
TS23: hypothalamus Present Widespread g00342_sj_g18_051_e15 , g00342_sj_g18_001_e15 , g00342_sj_g18_101_e15
TS23: midbrain Present Widespread g00342_sj_g18_001_e15 , g00342_sj_g18_051_e15 , g00342_sj_g18_101_e15
TS23: neocortex Present Widespread g00342_sj_g18_101_e15 , g00342_sj_g18_051_e15 , g00342_sj_g18_001_e15
TS23: main olfactory bulb Present Widespread g00342_sj_g18_051_e15 , g00342_sj_g18_001_e15 , g00342_sj_g18_101_e15
TS23: retina Present Regionally restricted g00342_sj_g18_101_e15 , g00342_sj_g18_001_e15 , g00342_sj_g18_051_e15
TS23: spinal cord Present Widespread g00342_sj_g18_101_e15 , g00342_sj_g18_001_e15 , g00342_sj_g18_051_e15

Specimen g00342 P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g00342_sj_g18_001_p7 , g00342_sj_g18_051_p7 , g00342_sj_g18_101_p7
TS28: basal ganglia Present Widespread g00342_sj_g18_101_p7 , g00342_sj_g18_051_p7 , g00342_sj_g18_001_p7
TS28: brainstem Present Widespread g00342_sj_g18_001_p7 , g00342_sj_g18_051_p7 , g00342_sj_g18_101_p7
TS28: cerebellum Present Regionally restricted g00342_sj_g18_001_p7 , g00342_sj_g18_051_p7 , g00342_sj_g18_101_p7 Expression was region specific and scattered.
TS28: cerebral cortex Present Widespread g00342_sj_g18_101_p7 , g00342_sj_g18_051_p7 , g00342_sj_g18_001_p7
TS28: choroid plexus Present Regionally restricted g00342_sj_g18_051_p7 , g00342_sj_g18_101_p7 , g00342_sj_g18_001_p7
TS28: hippocampus Present Regionally restricted g00342_sj_g18_051_p7 , g00342_sj_g18_101_p7 , g00342_sj_g18_001_p7 Expression was region specific and scattered.
TS28: hypothalamus Present Widespread g00342_sj_g18_001_p7 , g00342_sj_g18_051_p7 , g00342_sj_g18_101_p7
TS28: meninges Present Regionally restricted g00342_sj_g18_001_p7 , g00342_sj_g18_101_p7 , g00342_sj_g18_051_p7
TS28: midbrain Present Widespread g00342_sj_g18_051_p7 , g00342_sj_g18_101_p7 , g00342_sj_g18_001_p7
TS28: main olfactory bulb Present Regionally restricted g00342_sj_g18_001_p7 , g00342_sj_g18_051_p7 , g00342_sj_g18_101_p7 Expression was region specific and scattered.
TS28: retina Present Regionally restricted g00342_sj_g18_001_p7 , g00342_sj_g18_101_p7 , g00342_sj_g18_051_p7
TS28: spinal cord Present Regionally restricted g00342_sj_g18_051_p7 , g00342_sj_g18_101_p7 , g00342_sj_g18_001_p7 Expression was region specific and scattered.
TS28: thalamus Present Widespread g00342_sj_g18_001_p7 , g00342_sj_g18_101_p7 , g00342_sj_g18_051_p7


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
01/14/2020
MGI 6.14
The Jackson Laboratory