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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4829104
Gene symbol: Unc5d
Gene name: unc-5 netrin receptor D
Probe: T38081
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_012466_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012466_02
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_012466_02

Specimen euxassay_012466_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_012466_03
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012466_03

Specimen euxassay_012466_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012466_04
TS23: vibrissa Weak Regionally restricted euxassay_012466_04

Specimen euxassay_012466_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012466_05
TS23: metencephalon basal plate Strong Regionally restricted euxassay_012466_05
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012466_05
TS23: upper jaw molar Weak Regionally restricted euxassay_012466_05

Specimen euxassay_012466_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012466_06
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012466_06
TS23: metencephalon basal plate Moderate Regionally restricted euxassay_012466_06
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012466_06
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012466_06
TS23: upper jaw molar Weak Regionally restricted euxassay_012466_06
TS23: lower jaw molar Weak Regionally restricted euxassay_012466_06

Specimen euxassay_012466_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012466_07
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_012466_07
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012466_07
TS23: metencephalon basal plate Moderate Regionally restricted euxassay_012466_07
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_012466_07
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_012466_07
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012466_07

Specimen euxassay_012466_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012466_08
TS23: olfactory cortex ventricular layer Strong Regionally restricted euxassay_012466_08
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012466_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012466_08
TS23: metencephalon basal plate Moderate Regionally restricted euxassay_012466_08
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012466_08
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_012466_08
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_012466_08
TS23: upper jaw incisor Weak Regionally restricted euxassay_012466_08
TS23: lower jaw incisor Weak Regionally restricted euxassay_012466_08
TS23: clavicle Weak Regionally restricted euxassay_012466_08

Specimen euxassay_012466_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Strong Regionally restricted euxassay_012466_09
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012466_09
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012466_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012466_09
TS23: metencephalon basal plate Weak Regionally restricted euxassay_012466_09
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012466_09
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_012466_09
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_012466_09
TS23: ventral grey horn Weak Regionally restricted euxassay_012466_09
TS23: palatal shelf Weak Regionally restricted euxassay_012466_09
TS23: nasal cavity respiratory epithelium Moderate Spotted euxassay_012466_09

Specimen euxassay_012466_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012466_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012466_10
TS23: metencephalon basal plate Weak Regionally restricted euxassay_012466_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012466_10
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012466_10
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_012466_10
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_012466_10
TS23: ventral grey horn Weak Regionally restricted euxassay_012466_10
TS23: palatal shelf Weak Regionally restricted euxassay_012466_10
TS23: nasal cavity respiratory epithelium Weak Regionally restricted euxassay_012466_10

Specimen euxassay_012466_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012466_11
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_012466_11
TS23: metencephalon basal plate Weak Regionally restricted euxassay_012466_11
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_012466_11
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_012466_11
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012466_11
TS23: ventral grey horn Weak Regionally restricted euxassay_012466_11
TS23: upper lip Strong Regionally restricted euxassay_012466_11

Specimen euxassay_012466_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Strong Regionally restricted euxassay_012466_12
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012466_12
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012466_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012466_12
TS23: metencephalon basal plate Weak Regionally restricted euxassay_012466_12
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012466_12
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012466_12
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_012466_12
TS23: ventral grey horn Weak Regionally restricted euxassay_012466_12
TS23: palatal shelf Weak Regionally restricted euxassay_012466_12
TS23: nasal cavity respiratory epithelium Moderate Regionally restricted euxassay_012466_12

Specimen euxassay_012466_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012466_13
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012466_13
TS23: olfactory cortex ventricular layer Weak Regionally restricted euxassay_012466_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012466_13
TS23: metencephalon basal plate Moderate Regionally restricted euxassay_012466_13
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012466_13
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012466_13
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_012466_13
TS23: ventral grey horn Weak Regionally restricted euxassay_012466_13

Specimen euxassay_012466_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_012466_14
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012466_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012466_14
TS23: metencephalon basal plate Moderate Regionally restricted euxassay_012466_14
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012466_14
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012466_14
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_012466_14
TS23: ventral grey horn Weak Regionally restricted euxassay_012466_14
TS23: lower jaw incisor Weak Regionally restricted euxassay_012466_14
TS23: upper jaw incisor Weak Regionally restricted euxassay_012466_14
TS23: clavicle Weak Regionally restricted euxassay_012466_14

Specimen euxassay_012466_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012466_15
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_012466_15
TS23: metencephalon basal plate Moderate Regionally restricted euxassay_012466_15
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012466_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012466_15

Specimen euxassay_012466_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012466_16
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_012466_16
TS23: metencephalon basal plate Moderate Regionally restricted euxassay_012466_16
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012466_16
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012466_16
TS23: upper jaw molar Weak Regionally restricted euxassay_012466_16
TS23: lower jaw molar Weak Regionally restricted euxassay_012466_16

Specimen euxassay_012466_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012466_17
TS23: metencephalon basal plate Strong Regionally restricted euxassay_012466_17
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_012466_17
TS23: upper jaw molar Weak Regionally restricted euxassay_012466_17

Specimen euxassay_012466_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012466_18

Specimen euxassay_012466_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012466_19

Specimen euxassay_012466_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012466_20
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_012466_20

Specimen euxassay_012466_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012466_21


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
01/14/2020
MGI 6.14
The Jackson Laboratory