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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827670
Gene symbol: Rcsd1
Gene name: RCSD domain containing 1
Probe: MGC clone 32399
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_003001_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon meninges Strong Regionally restricted euxassay_003001_01

Specimen euxassay_003001_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon meninges Strong Regionally restricted euxassay_003001_02

Specimen euxassay_003001_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon meninges Strong Regionally restricted euxassay_003001_03

Specimen euxassay_003001_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindbrain meninges Strong Regionally restricted euxassay_003001_04
TS23: telencephalon meninges Strong Regionally restricted euxassay_003001_04

Specimen euxassay_003001_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindbrain meninges Strong Regionally restricted euxassay_003001_05
TS23: telencephalon meninges Strong Regionally restricted euxassay_003001_05

Specimen euxassay_003001_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain meninges Strong Regionally restricted euxassay_003001_06
TS23: hindbrain meninges Strong Regionally restricted euxassay_003001_06
TS23: telencephalon meninges Strong Regionally restricted euxassay_003001_06

Specimen euxassay_003001_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: midbrain meninges Strong Regionally restricted euxassay_003001_07
TS23: hindbrain meninges Strong Regionally restricted euxassay_003001_07
TS23: telencephalon meninges Strong Regionally restricted euxassay_003001_07
TS23: stomach Strong Regionally restricted euxassay_003001_07 smooth muscle
TS23: smooth muscle tissue Present euxassay_003001_07
TS23: midgut Strong Regionally restricted euxassay_003001_07 smooth muscle

Specimen euxassay_003001_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: midbrain meninges Strong Regionally restricted euxassay_003001_08
TS23: hindbrain meninges Strong Regionally restricted euxassay_003001_08
TS23: telencephalon meninges Strong Regionally restricted euxassay_003001_08
TS23: diencephalon meninges Strong Regionally restricted euxassay_003001_08
TS23: stomach Strong Regionally restricted euxassay_003001_08 smooth muscle
TS23: smooth muscle tissue Present euxassay_003001_08
TS23: midgut Strong Regionally restricted euxassay_003001_08 smooth muscle

Specimen euxassay_003001_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: midbrain meninges Strong Regionally restricted euxassay_003001_09
TS23: hindbrain meninges Strong Regionally restricted euxassay_003001_09
TS23: telencephalon meninges Strong Regionally restricted euxassay_003001_09
TS23: diencephalon meninges Strong Regionally restricted euxassay_003001_09
TS23: stomach Strong Regionally restricted euxassay_003001_09 smooth muscle
TS23: smooth muscle tissue Present euxassay_003001_09
TS23: midgut Strong Regionally restricted euxassay_003001_09 smooth muscle
TS23: maturing glomerular tuft Strong Regionally restricted euxassay_003001_09

Specimen euxassay_003001_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: midbrain meninges Strong Regionally restricted euxassay_003001_10
TS23: hindbrain meninges Strong Regionally restricted euxassay_003001_10
TS23: telencephalon meninges Strong Regionally restricted euxassay_003001_10
TS23: diencephalon meninges Strong Regionally restricted euxassay_003001_10
TS23: stomach Strong Regionally restricted euxassay_003001_10 smooth muscle
TS23: smooth muscle tissue Present euxassay_003001_10
TS23: midgut Strong Regionally restricted euxassay_003001_10 smooth muscle
TS23: maturing glomerular tuft Strong Regionally restricted euxassay_003001_10

Specimen euxassay_003001_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: midbrain meninges Strong Regionally restricted euxassay_003001_11
TS23: hindbrain meninges Strong Regionally restricted euxassay_003001_11
TS23: telencephalon meninges Strong Regionally restricted euxassay_003001_11
TS23: diencephalon meninges Strong Regionally restricted euxassay_003001_11
TS23: midgut Strong Regionally restricted euxassay_003001_11 smooth muscle
TS23: stomach Strong Regionally restricted euxassay_003001_11 smooth muscle
TS23: smooth muscle tissue Present euxassay_003001_11
TS23: maturing glomerular tuft Strong Regionally restricted euxassay_003001_11

Specimen euxassay_003001_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: thymus primordium Moderate Uniform euxassay_003001_12
TS23: midbrain meninges Strong Regionally restricted euxassay_003001_12
TS23: hindbrain meninges Strong Regionally restricted euxassay_003001_12
TS23: telencephalon meninges Strong Regionally restricted euxassay_003001_12
TS23: diencephalon meninges Strong Regionally restricted euxassay_003001_12
TS23: midgut Strong Regionally restricted euxassay_003001_12 smooth muscle
TS23: stomach Strong Regionally restricted euxassay_003001_12 smooth muscle
TS23: smooth muscle tissue Present euxassay_003001_12
TS23: maturing glomerular tuft Strong Regionally restricted euxassay_003001_12

Specimen euxassay_003001_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: thymus primordium Moderate Uniform euxassay_003001_13
TS23: midbrain meninges Strong Regionally restricted euxassay_003001_13
TS23: hindbrain meninges Strong Regionally restricted euxassay_003001_13
TS23: telencephalon meninges Strong Regionally restricted euxassay_003001_13
TS23: diencephalon meninges Strong Regionally restricted euxassay_003001_13
TS23: midgut Strong Regionally restricted euxassay_003001_13 smooth muscle
TS23: smooth muscle tissue Present euxassay_003001_13
TS23: esophagus Strong Regionally restricted euxassay_003001_13
TS23: maturing glomerular tuft Strong Regionally restricted euxassay_003001_13

Specimen euxassay_003001_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: thymus primordium Moderate Uniform euxassay_003001_14
TS23: midbrain meninges Strong Regionally restricted euxassay_003001_14
TS23: hindbrain meninges Strong Regionally restricted euxassay_003001_14
TS23: telencephalon meninges Strong Regionally restricted euxassay_003001_14
TS23: diencephalon meninges Strong Regionally restricted euxassay_003001_14
TS23: midgut Strong Regionally restricted euxassay_003001_14 smooth muscle
TS23: smooth muscle tissue Present euxassay_003001_14
TS23: esophagus Strong Regionally restricted euxassay_003001_14

Specimen euxassay_003001_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: thymus primordium Moderate Uniform euxassay_003001_15
TS23: midbrain meninges Strong Regionally restricted euxassay_003001_15
TS23: hindbrain meninges Strong Regionally restricted euxassay_003001_15
TS23: telencephalon meninges Strong Regionally restricted euxassay_003001_15
TS23: diencephalon meninges Strong Regionally restricted euxassay_003001_15
TS23: midgut Strong Regionally restricted euxassay_003001_15 smooth muscle
TS23: rectum Strong Regionally restricted euxassay_003001_15 smooth muscle
TS23: hindgut Strong Regionally restricted euxassay_003001_15 smooth muscle
TS23: smooth muscle tissue Present euxassay_003001_15
TS23: esophagus Strong Regionally restricted euxassay_003001_15

Specimen euxassay_003001_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: thymus primordium Moderate Uniform euxassay_003001_16
TS23: diencephalon meninges Strong Regionally restricted euxassay_003001_16
TS23: telencephalon meninges Strong Regionally restricted euxassay_003001_16
TS23: hindbrain meninges Strong Regionally restricted euxassay_003001_16
TS23: midbrain meninges Strong Regionally restricted euxassay_003001_16
TS23: midgut Strong Regionally restricted euxassay_003001_16 smooth muscle
TS23: rectum Strong Regionally restricted euxassay_003001_16 smooth muscle
TS23: hindgut Strong Regionally restricted euxassay_003001_16 smooth muscle
TS23: smooth muscle tissue Present euxassay_003001_16

Specimen euxassay_003001_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: thymus primordium Moderate Uniform euxassay_003001_17
TS23: midbrain meninges Strong Regionally restricted euxassay_003001_17
TS23: hindbrain meninges Strong Regionally restricted euxassay_003001_17
TS23: telencephalon meninges Strong Regionally restricted euxassay_003001_17
TS23: diencephalon meninges Strong Regionally restricted euxassay_003001_17
TS23: midgut Strong Regionally restricted euxassay_003001_17 smooth muscle
TS23: smooth muscle tissue Present euxassay_003001_17
TS23: esophagus Strong Regionally restricted euxassay_003001_17

Specimen euxassay_003001_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: diencephalon meninges Strong Regionally restricted euxassay_003001_18
TS23: telencephalon meninges Strong Regionally restricted euxassay_003001_18
TS23: midbrain meninges Strong Regionally restricted euxassay_003001_18
TS23: hindbrain meninges Strong Regionally restricted euxassay_003001_18
TS23: midgut Strong Regionally restricted euxassay_003001_18 smooth muscle
TS23: smooth muscle tissue Present euxassay_003001_18
TS23: maturing glomerular tuft Strong Regionally restricted euxassay_003001_18

Specimen euxassay_003001_19: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: diencephalon meninges Strong Regionally restricted euxassay_003001_19
TS23: telencephalon meninges Strong Regionally restricted euxassay_003001_19
TS23: hindbrain meninges Strong Regionally restricted euxassay_003001_19
TS23: midbrain meninges Strong Regionally restricted euxassay_003001_19
TS23: midgut Strong Regionally restricted euxassay_003001_19 smooth muscle
TS23: smooth muscle tissue Present euxassay_003001_19
TS23: maturing glomerular tuft Strong Regionally restricted euxassay_003001_19

Specimen euxassay_003001_20: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: hindbrain meninges Strong Regionally restricted euxassay_003001_20
TS23: midbrain meninges Strong Regionally restricted euxassay_003001_20
TS23: telencephalon meninges Strong Regionally restricted euxassay_003001_20
TS23: diencephalon meninges Strong Regionally restricted euxassay_003001_20
TS23: midgut Strong Regionally restricted euxassay_003001_20 smooth muscle
TS23: smooth muscle tissue Present euxassay_003001_20
TS23: maturing glomerular tuft Strong Regionally restricted euxassay_003001_20

Specimen euxassay_003001_21: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: hindbrain meninges Strong Regionally restricted euxassay_003001_21
TS23: telencephalon meninges Strong Regionally restricted euxassay_003001_21
TS23: midgut Strong Regionally restricted euxassay_003001_21 smooth muscle
TS23: smooth muscle tissue Present euxassay_003001_21
TS23: maturing glomerular tuft Strong Regionally restricted euxassay_003001_21

Specimen euxassay_003001_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon meninges Strong Regionally restricted euxassay_003001_22
TS23: hindbrain meninges Strong Regionally restricted euxassay_003001_22
TS23: maturing glomerular tuft Strong Regionally restricted euxassay_003001_22

Specimen euxassay_003001_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon meninges Strong Regionally restricted euxassay_003001_23
TS23: hindbrain meninges Strong Regionally restricted euxassay_003001_23
TS23: maturing glomerular tuft Strong Regionally restricted euxassay_003001_23

Specimen euxassay_003001_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon meninges Strong Regionally restricted euxassay_003001_24


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/12/2021
MGI 6.17
The Jackson Laboratory